This is an example of a Fasta Report.
(Nucleotide) FASTA of: t57624.gb_est1 from: 1 to: 89 March 11, 1997 13:09
LOCUS T57624 89 bp mRNA EST 08-FEB-1995
DEFINITION yb59c04.s1 Homo sapiens cDNA clone 75462 3' similar to gb:X59812
STEROL 26-HYDROXYLASE MITOCHONDRIAL PRECURSOR (HUMAN).
ACCESSION T57624
NID g659485
KEYWORDS EST. . . .
TO: gbplus:* Sequences: 1,269,862 Symbols: 836,738,430 Word Size: 6
Scoring matrix: GenRunData:fastadna.cmp
Constant pamfactor used
Gap creation penalty: 12.0 Gap extension penalty: 4.0
Histogram Key:
Each histogram symbol represents 13219 search set sequences
Each inset symbol represents 2 search set sequences
Score Init1 Initn
(-) (+)
< 4 126127 126127:==========
8 1711 1711:=
12 1858 1858:=
16 3572 3572:=
20 27800 27800:===
24 494210 494210:======================================
28 793110 793110:============================================================
32 523991 523991:========================================
36 239758 239758:===================
40 101260 101260:========
44 57321 57321:=====
48 42481 42346:====
52 30278 29833:===
56 21255 20790:==
60 15141 14775:==
64 12124 11794:=
68 8797 8615:=
72 8213 8099:=
76 5861 5810:=
80 5207 5379:=
84 10196 10584:=
88 5108 5439:=
92 1696 2023:=
96 1023 1304:=
100 557 756:=
104 446 547:=
108 199 288:=
112 145 218:=
116 81 128:=
120 55 78:=
124 18 40:=
128 21 34:=
132 7 15:=
136 1 3:=
140 3 6:=
144 0 5:+
148 4 5:= :==+
152 0 0: :
156 0 3:+ :++
160 0 0: :
164 0 0: :
168 1 1:= :=
172 0 0: :
176 1 1:= :=
180 0 0: :
184 0 0: :
188 1 0:- :-
192 3 3:= :==
196 2 2:= :=
200 2 2:= :=
>200 79 80:= :========================================
Mean score calculations exclude scores greater than 121
mean initn score: 30.2 (s.d. 11.69)
mean init1 score: 30.2 (s.d. 11.58)
1654 scores better than 100 saved, joining threshold: 46
The best scores are: init1 initn opt..
gb_est1:t57624 T57624 yb59c04.s1 Homo sapiens cDNA clone... 348 348 348
gb_pr:hsanac /rev X80909 H.sapiens alpha NAC mRNA. 1/97 341 341 341
gb_est4:h50168 /rev H50168 yo27g03.r1 Homo sapiens cDNA ... 334 334 334
gb_est9:aa075316 AA075316 zm84h07.s1 Stratagene ovarian ... 327 327 329
gb_est9:aa173407 AA173407 zp02b01.s1 Stratagene ovarian ... 306 306 309
gb_est1:t57622 T57622 yb59b07.s1 Homo sapiens cDNA clone... 295 295 295
gb_est5:n73788 N73788 yz80c05.s1 Homo sapiens cDNA clone... 293 293 293
gb_est10:aa192925 AA192925 zp94c02.s1 Stratagene muscle ... 289 289 289
gb_est5:n66328 N66328 yz38d05.s1 Homo sapiens cDNA clone... 289 289 289
gb_est5:hsafic089 Z21584 H. sapiens partial cDNA sequenc... 287 287 287
gb_new:aa225578 AA225578 nc08d03.r1 NCI CGAP Pr1 Homo sa... 285 285 285
gb_est7:n95290 N95290 zb60e12.s1 Soares fetal lung NbHL1... 283 283 283
gb_est10:aa190179 /rev AA190179 IBD013 Human Ulcerative ... 282 282 282
gb_est5:n67208 N67208 yz48c03.s1 Homo sapiens cDNA clone... 282 282 282
gb_est9:aa147706 AA147706 zo44e08.s1 Stratagene endothel... 279 279 279
gb_est9:aa165420 AA165420 zo81g06.s1 Stratagene ovarian ... 260 260 263
gb_est8:w73231 W73231 zd56c12.s1 Soares fetal heart NbHH... 260 260 260
gb_est5:n52598 N52598 yz23d04.s1 Homo sapiens cDNA clone... 260 260 260
gb_est9:aa130466 AA130466 zo06b12.s1 Stratagene endothel... 260 260 260
gb_est10:aa025829 AA025829 ze91h05.s1 Soares fetal heart... 260 260 260
gb_est10:aa179911 AA179911 zp56b10.s1 Stratagene NT2 neu... 260 260 260
gb_est8:humhm05a02 /rev D11861 Human HepG2 3'-directed M... 260 260 265
gb_est4:t34686 T34686 EST73050 Homo sapiens cDNA 3' end ... 260 260 260
gb_est5:n78932 N78932 za92h07.s1 Homo sapiens cDNA clone... 260 260 260
gb_est9:aa133732 AA133732 zo40f09.s1 Stratagene endothel... 260 260 261
gb_est4:t35463 T35463 EST85776 Homo sapiens cDNA 5' end ... 260 260 260
gb_est9:aa148134 AA148134 zo43e06.s1 Stratagene endothel... 260 260 263
gb_est5:hsczqd082 Z41317 H. sapiens partial cDNA sequenc... 260 260 260
gb_est8:w49651 W49651 zc41d01.s1 Soares senescent fibrob... 260 260 273
gb_est9:aa165124 AA165124 zo88g10.s1 Stratagene ovarian ... 260 260 260
gb_est7:n89716 N89716 zb13f08.s1 Soares fetal lung NbHL1... 260 260 260
gb_est4:t30352 T30352 EST15279 Homo sapiens cDNA 5' end ... 260 260 260
gb_est5:n39028 N39028 yv22d06.s1 Homo sapiens cDNA clone... 260 260 266
gb_est9:aa143233 AA143233 zo36g01.s1 Stratagene endothel... 260 260 261
gb_est9:aa127080 AA127080 zn28g09.s1 Stratagene neuroepi... 260 260 260
gb_est10:aa181556 AA181556 zp51b05.s1 Stratagene HeLa ce... 260 260 260
gb_est9:aa081369 AA081369 zn04c09.s1 Stratagene hNT neur... 260 260 260
gb_est4:h77406 H77406 yu08d09.s1 Homo sapiens cDNA clone... 260 260 261
gb_est8:w47407 W47407 zc35d03.s1 Soares senescent fibrob... 260 260 271
gb_est8:aa102495 AA102495 zn42e02.s1 Stratagene endothel... 260 260 260
t57624.gb_est1
gb_est1:t57624
LOCUS T57624 89 bp mRNA EST 08-FEB-1995
DEFINITION yb59c04.s1 Homo sapiens cDNA clone 75462 3' similar to gb:X59812
STEROL 26-HYDROXYLASE MITOCHONDRIAL PRECURSOR (HUMAN).
ACCESSION T57624
NID g659485
KEYWORDS EST. . . .
SCORES Init1: 348 Initn: 348 Opt: 348
100.0% identity in 89 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
10 20 30 40 50 60
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
70 80
t57624.gb_est1 /rev
gb_pr:hsanac
LOCUS HSANAC 797 bp RNA PRI 14-JAN-1997
DEFINITION H.sapiens alpha NAC mRNA.
ACCESSION X80909
NID g556641
KEYWORDS nac gene.
SOURCE human. . . .
SCORES Init1: 341 Initn: 341 Opt: 341
96.6% identity in 89 bp overlap
89 79 69 60
t57624 AGTAACTGCAGCTTGGTTTGAAATTTGTAC
||||||||||||||||||||||||||||||
hsanac TGGAAGCAACTTTTTTTGGTGTCTCAAAGGAGTAACTGCAGCTTGGTTTGAAATTTGTAC
680 690 700 710 720 730
59 49 39 29 19 9
t57624 TGTTTCTNTCATAAATAAAGTTNTGGCTTCTTGTTGGTAAAAAAAAAAAAAAAAAAAAA
|||||||:||||||||||||||:|||||||||||||| |||||||||||||||||||||
hsanac TGTTTCTATCATAAATAAAGTTATGGCTTCTTGTTGGAAAAAAAAAAAAAAAAAAAAAA
740 750 760 770 780 790
t57624.gb_est1 /rev
gb_est4:h50168
LOCUS H50168 379 bp mRNA EST 18-SEP-1995
DEFINITION yo27g03.r1 Homo sapiens cDNA clone 179188 5'.
ACCESSION H50168
NID g990009
KEYWORDS EST.
SOURCE clone=179188 primer=M13RP1 library=Soares adult brain N2b5HB55Y . . .
SCORES Init1: 334 Initn: 334 Opt: 334
95.5% identity in 89 bp overlap
89 79 69 60
t57624 AGTAACTGCAGCTTGGTTTGAAATTTGTAC
||||||||||||||||||||||||||||||
h50168 TGGAAGCAACTTTTTTTGGTGTCTCAAAGGAGTAACTGCAGCTTGGTTTGAAATTTGTAC
190 200 210 220 230 240
59 49 39 29 19 9
t57624 TGTTTCTNTCATAAATAAAGTTNTGGCTTCTTGTTGGTAAAAAAAAAAAAAAAAAAAAA
|||||||:||||||||||||||:| |||||||||||| |||||||||||||||||||||
h50168 TGTTTCTATCATAAATAAAGTTATTGCTTCTTGTTGGAAAAAAAAAAAAAAAAAAAAAAA
250 260 270 280 290 300
h50168 AAAAAAAAAAAAAAAAAAAAAAAAGGCGNGGCCGCAGGCTTTTNCCCTTTGGTGGGGGTT
310 320 330 340 350 360
t57624.gb_est1
gb_est9:aa075316
LOCUS AA075316 377 bp mRNA EST 01-DEC-1996
DEFINITION zm84h07.s1 Stratagene ovarian cancer (#937219) Homo sapiens cDNA
clone 544669 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA075316
NID g1615187 . . .
SCORES Init1: 327 Initn: 327 Opt: 329
95.6% identity in 90 bp overlap
10 20 30 40 50
t57624 TTTTTTTTTTTTTTTTTTTTTA-CCAACAAGAAGCCANAACTTTATTTATGANAGAA
|||||||||||||||||||| | ||||||||||||||:||||||||||||||:||||
aa0753 TTTTTTTTTTTTTTTTTTTTTTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAA
10 20 30 40 50 60
60 70 80 89
t57624 ACAGTACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||||||
aa0753 ACAGTACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTT
70 80 90 100 110 120
aa0753 CCATATGGTTACATTGTTAATTCCATAATCGCATTTACAATATCATTACTGTTGTTCTTC
130 140 150 160 170 180
t57624.gb_est1
gb_est9:aa173407
LOCUS AA173407 382 bp mRNA EST 26-DEC-1996
DEFINITION zp02b01.s1 Stratagene ovarian cancer (#937219) Homo sapiens cDNA
clone 595177 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA173407
NID g1753536 . . .
SCORES Init1: 306 Initn: 306 Opt: 309
92.5% identity in 93 bp overlap
10 20 30 40
t57624 TTTTTTTTTTTTTTTTTT---TTTA-CCAACAAGAAGCCANAACTTTAT
|||||||||||||||||| || | ||||||||||||||:||||||||
aa1734 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATTCATCCAACAAGAAGCCATAACTTTAT
10 20 30 40 50 60
50 60 70 80 89
t57624 TTATGANAGAAACAGTACAAATTTCAAACCAAGCTGCAGTTACT
||||||:|||||||||||||||||||||||||||||||||||||
aa1734 TTATGATAGAAACAGTACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAA
70 80 90 100 110 120
aa1734 AAAAGTTGCTTCCATATGGTTACATTGTTAATTCCATAATCGCATTTACAATATCATTAC
130 140 150 160 170 180
t57624.gb_est1
gb_est1:t57622
LOCUS T57622 310 bp mRNA EST 08-FEB-1995
DEFINITION yb59b07.s1 Homo sapiens cDNA clone 75445 3'.
ACCESSION T57622
NID g659483
KEYWORDS EST.
SOURCE human clone=75445 library=Stratagene ovary (#937217) . . .
SCORES Init1: 295 Initn: 295 Opt: 295
93.8% identity in 81 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||| ||||||||||||||:||||||||||||||:||||||||
t57622 TTTTTTTTTTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40 50
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
t57622 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
60 70 80 90 100 110
t57624.gb_est1
gb_est5:n73788
LOCUS N73788 362 bp mRNA EST 19-MAR-1996
DEFINITION yz80c05.s1 Homo sapiens cDNA clone 289352 3' similar to PIR:S49326
S49326 Nascent polypeptide associated complex alpha chain - human
;.
ACCESSION N73788
NID g1231073 . . .
SCORES Init1: 293 Initn: 293 Opt: 293
96.1% identity in 77 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||||||||| ||||||||||||||:||||||||||||||:||||||||
n73788 TTTTTTTTTTTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
||||||||||||||||||||||||||||:
n73788 TACAAATTTCAAACCAAGCTGCAGTTACNCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est10:aa192925
LOCUS AA192925 243 bp mRNA EST 16-JAN-1997
DEFINITION zp94c02.s1 Stratagene muscle 937209 Homo sapiens cDNA clone 627842
3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE ASSOCIATED
COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA192925
NID g1782381 . . .
SCORES Init1: 289 Initn: 289 Opt: 289
96.1% identity in 76 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||||||| ||||||||||||||:||||||||||||||:||||||||
aa1929 TTTTTTTTTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1929 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est5:n66328
LOCUS N66328 265 bp mRNA EST 08-MAR-1996
DEFINITION yz38d05.s1 Homo sapiens cDNA clone 285321 3' similar to PIR:S49326
S49326 Nascent polypeptide associated complex alpha chain - human
;.
ACCESSION N66328
NID g1218453 . . .
SCORES Init1: 289 Initn: 289 Opt: 289
96.1% identity in 76 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||||||| ||||||||||||||:||||||||||||||:||||||||
n66328 TTTTTTTTTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n66328 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est5:hsafic089
LOCUS HSAFIC089 253 bp RNA EST 03-FEB-1994
DEFINITION H. sapiens partial cDNA sequence; clone FIc089; single read.
ACCESSION Z21584
NID g28494
KEYWORDS partial cDNA sequence; transcribed sequence fragment.
SOURCE human. . . .
SCORES Init1: 287 Initn: 287 Opt: 287
93.7% identity in 79 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||| ||||||||||||||:||||||||||||||:||||||||
hsafic TTTTTTTTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40 50
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
hsafic TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
60 70 80 90 100 110
t57624.gb_est1
gb_new:aa225578
LOCUS AA225578 379 bp mRNA EST 21-FEB-1997
DEFINITION nc08d03.r1 NCI CGAP Pr1 Homo sapiens cDNA clone 1662 similar to
TR:G556642 G556642 NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA
SUBUNIT. ;.
ACCESSION AA225578
NID g1846981 . . .
SCORES Init1: 285 Initn: 285 Opt: 285
96.0% identity in 75 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||| ||||||||||||||:||||||||||||||:||||||||
aa2255 TCGACTTTTTTTTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40 50
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa2255 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
60 70 80 90 100 110
t57624.gb_est1
gb_est7:n95290
LOCUS N95290 510 bp mRNA EST 20-AUG-1996
DEFINITION zb60e12.s1 Soares fetal lung NbHL19W Homo sapiens cDNA clone 308014
3' similar to PIR:S49326 S49326 Nascent polypeptide associated
complex alpha chain - human ;.
ACCESSION N95290
NID g1267561 . . .
SCORES Init1: 283 Initn: 283 Opt: 283
93.6% identity in 78 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||||||| ||||||||||||||:||||||||||||||:||||||||
n95290 TTTTTTTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n95290 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1 /rev
gb_est10:aa190179
LOCUS AA190179 291 bp mRNA EST 13-JAN-1997
DEFINITION IBD013 Human Ulcerative Colitis Mucosa Express Library Homo sapiens
cDNA 5'.
ACCESSION AA190179
NID g1777239
KEYWORDS EST. . . .
SCORES Init1: 282 Initn: 282 Opt: 282
93.5% identity in 77 bp overlap
89 79 69 60
t57624 AGTAACTGCAGCTTGGTTTGAAATTTGTAC
||||||||||||||||||||||||||||||
aa1901 TGGAAGCAACTTTTTTTGGTGTCTCAAAGGAGTAACTGCAGCTTGGTTTGAAATTTGTAC
190 200 210 220 230 240
59 49 39 29 19 9
t57624 TGTTTCTNTCATAAATAAAGTTNTGGCTTCTTGTTGGTAAAAAAAAAAAAAAAAAAAAA
|||||||:||||||||||||||:|||||||||||||| :|||||||
aa1901 TGTTTCTATCATAAATAAAGTTATGGCTTCTTGTTGGAGNAAAAAAACTT
250 260 270 280 290
t57624.gb_est1
gb_est5:n67208
LOCUS N67208 198 bp mRNA EST 18-MAR-1996
DEFINITION yz48c03.s1 Homo sapiens cDNA clone 286276 3' similar to PIR:S49326
S49326 Nascent polypeptide associated complex alpha chain - human
;.
ACCESSION N67208
NID g1219333 . . .
SCORES Init1: 282 Initn: 282 Opt: 282
94.7% identity in 76 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||||||| |||||||||||||:||||||||||||||:||||||||
n67208 TTTTTTTTTTCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n67208 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa147706
LOCUS AA147706 421 bp mRNA EST 05-DEC-1996
DEFINITION zo44e08.s1 Stratagene endothelial cell 937223 Homo sapiens cDNA
clone 589766 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA147706
NID g1717111 . . .
SCORES Init1: 279 Initn: 279 Opt: 279
93.5% identity in 77 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||| ||||||||||||||:||||||||||||||:||||||||
aa1477 TTTTTTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1477 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa165420
LOCUS AA165420 584 bp mRNA EST 18-DEC-1996
DEFINITION zo81g06.s1 Stratagene ovarian cancer (#937219) Homo sapiens cDNA
clone 593338 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA165420
NID g1741556 . . .
SCORES Init1: 260 Initn: 260 Opt: 263
93.2% identity in 73 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||| ||||||||||||||:||||||||||||||:||||||||
aa1654 TTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1654 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est8:w73231
LOCUS W73231 741 bp mRNA EST 16-OCT-1996
DEFINITION zd56c12.s1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
344662 3' similar to PIR:S49326 S49326 Nascent polypeptide
associated complex alpha chain - human ;.
ACCESSION W73231
NID g1383365 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
w73231 TCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
w73231 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
40 50 60 70 80 90
t57624.gb_est1
gb_est5:n52598
LOCUS N52598 446 bp mRNA EST 15-FEB-1996
DEFINITION yz23d04.s1 Homo sapiens cDNA clone 283879 3' similar to PIR:S49326
S49326 Nascent polypeptide associated complex alpha chain - human
;.
ACCESSION N52598
NID g1193764 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
n52598 CATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n52598 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa130466
LOCUS AA130466 396 bp mRNA EST 27-NOV-1996
DEFINITION zo06b12.s1 Stratagene endothelial cell 937223 Homo sapiens cDNA
clone 566879 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA130466
NID g1691766 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa1304 TCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1304 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est10:aa025829
LOCUS AA025829 398 bp mRNA EST 01-FEB-1997
DEFINITION ze91h05.s1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
366393 3' similar to PIR:S49326 S49326 Nascent polypeptide
associated complex alpha chain - human ;.
ACCESSION AA025829
NID g1491175 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa0258 CATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa0258 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est10:aa179911
LOCUS AA179911 440 bp mRNA EST 31-DEC-1996
DEFINITION zp56b10.s1 Stratagene NT2 neuronal precursor 937230 Homo sapiens
cDNA clone 613435 3' similar to TR:G556642 G556642 NASCENT
POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA179911
NID g1761175 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa1799 TCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1799 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
40 50 60 70 80 90
t57624.gb_est1 /rev
gb_est8:humhm05a02
LOCUS HUMHM05A02 373 bp mRNA EST 03-OCT-1996
DEFINITION Human HepG2 3'-directed MboI cDNA, clone hm05a02.
ACCESSION D11861
NID g767821
KEYWORDS EST(expressed sequence tag).
SOURCE Homo sapiens Male Liver Hepatocyte cell_line:HepG2 cDNA to mRNA. . . .
SCORES Init1: 260 Initn: 260 Opt: 265
95.7% identity in 70 bp overlap
89 79 69 60
t57624 AGTAACTGCAGCTTGGTTTGAAATTTGTAC
||||||||||||||||||||||||||||||
humhm0 TGGAAGCANCTTTTTTTGGTGTCTCAAAGGAGTAACTGCAGCTTGGTTTGAAATTTGTAC
280 290 300 310 320 330
59 49 39 29 19 9
t57624 TGTTTCTNTCATAAATAAAGTTNTGGCTTCTTGTTGGTAAAAAAAAAAAAAAAAAAAAA
|||||||:||||||||||||||:|||||||||||||| ||
humhm0 TGTTTCTATCATAAATAAAGTTATGGCTTCTTGTTGGAAA
340 350 360 370
t57624.gb_est1
gb_est4:t34686
LOCUS T34686 247 bp mRNA EST 06-SEP-1995
DEFINITION EST73050 Homo sapiens cDNA 3' end similar to None.
ACCESSION T34686
NID g616784
KEYWORDS EST.
SOURCE human primer=M13-21 library=Human Ovary. . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
t34686 CCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
t34686 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTNGCTNCCAT
40 50 60 70 80 90
t57624.gb_est1
gb_est5:n78932
LOCUS N78932 458 bp mRNA EST 29-MAR-1996
DEFINITION za92h07.s1 Homo sapiens cDNA clone 300061 3' similar to PIR:S49326
S49326 Nascent polypeptide associated complex alpha chain - human
;.
ACCESSION N78932
NID g1241633 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
n78932 CATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n78932 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa133732
LOCUS AA133732 460 bp mRNA EST 27-NOV-1996
DEFINITION zo40f09.s1 Stratagene endothelial cell 937223 Homo sapiens cDNA
clone 589385 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA133732
NID g1690899 . . .
SCORES Init1: 260 Initn: 260 Opt: 261
95.7% identity in 69 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
| ||||||||||||||:||||||||||||||:||||||||
aa1337 TTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1337 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est4:t35463
LOCUS T35463 205 bp mRNA EST 06-SEP-1995
DEFINITION EST85776 Homo sapiens cDNA 5' end similar to similar to S.
cerevisiae expressed sequence tags.
ACCESSION T35463
NID g617561
KEYWORDS EST. . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
t35463 CATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
t35463 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa148134
LOCUS AA148134 610 bp mRNA EST 05-DEC-1996
DEFINITION zo43e06.s1 Stratagene endothelial cell 937223 Homo sapiens cDNA
clone 589666 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA148134
NID g1717508 . . .
SCORES Init1: 260 Initn: 260 Opt: 263
93.2% identity in 73 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||| ||||||||||||||:||||||||||||||:||||||||
aa1481 TTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1481 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est5:hsczqd082
LOCUS HSCZQD082 297 bp RNA EST 21-SEP-1995
DEFINITION H. sapiens partial cDNA sequence; clone c-zqd08.
ACCESSION Z41317
NID g567456
KEYWORDS partial cDNA sequence; transcribed sequence fragment.
SOURCE human. . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
hsczqd CATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
hsczqd TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est8:w49651
LOCUS W49651 468 bp mRNA EST 11-OCT-1996
DEFINITION zc41d01.s1 Soares senescent fibroblasts NbHSF Homo sapiens cDNA
clone 324865 3' similar to PIR:S49326 S49326 Nascent polypeptide
associated complex alpha chain - human ;.
ACCESSION W49651
NID g1337906 . . .
SCORES Init1: 260 Initn: 260 Opt: 273
95.8% identity in 72 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||| ||||||||||||||:||||||||||||||:||||||||
w49651 TTTTTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
w49651 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa165124
LOCUS AA165124 476 bp mRNA EST 18-DEC-1996
DEFINITION zo88g10.s1 Stratagene ovarian cancer (#937219) Homo sapiens cDNA
clone 594018 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA165124
NID g1740379 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa1651 TCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1651 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
40 50 60 70 80 90
t57624.gb_est1
gb_est7:n89716
LOCUS N89716 414 bp mRNA EST 02-APR-1996
DEFINITION zb13f08.s1 Soares fetal lung NbHL19W Homo sapiens cDNA clone 301959
3' similar to PIR:S49326 S49326 Nascent polypeptide associated
complex alpha chain - human ;contains Alu repetitive element;.
ACCESSION N89716
NID g1443043 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
n89716 CCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n89716 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
40 50 60 70 80 90
t57624.gb_est1
gb_est4:t30352
LOCUS T30352 320 bp mRNA EST 06-SEP-1995
DEFINITION EST15279 Homo sapiens cDNA 5' end similar to similar to S.
cerevisiae hypothetical protein, cosmid 9998.
ACCESSION T30352
NID g612450
KEYWORDS EST. . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
t30352 CCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
t30352 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
40 50 60 70 80 90
t57624.gb_est1
gb_est5:n39028
LOCUS N39028 534 bp mRNA EST 19-JAN-1996
DEFINITION yv22d06.s1 Homo sapiens cDNA clone 243467 3' similar to PIR:S49326
S49326 Nascent polypeptide associated complex alpha chain - human
;.
ACCESSION N39028
NID g1162235 . . .
SCORES Init1: 260 Initn: 260 Opt: 266
89.9% identity in 79 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
|||| || ||||||||||||||:||||||||||||||:||||||||
n39028 TTTTGAATTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40 50
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
n39028 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
60 70 80 90 100 110
t57624.gb_est1
gb_est9:aa143233
LOCUS AA143233 435 bp mRNA EST 04-DEC-1996
DEFINITION zo36g01.s1 Stratagene endothelial cell 937223 Homo sapiens cDNA
clone 589008 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA143233
NID g1712604 . . .
SCORES Init1: 260 Initn: 260 Opt: 261
95.7% identity in 69 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
| ||||||||||||||:||||||||||||||:||||||||
aa1432 TTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1432 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est9:aa127080
LOCUS AA127080 451 bp mRNA EST 26-NOV-1996
DEFINITION zn28g09.s1 Stratagene neuroepithelium NT2RAMI 937234 Homo sapiens
cDNA clone 548800 3' similar to TR:G556642 G556642 NASCENT
POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA127080
NID g1686450 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa1270 TCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1270 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est10:aa181556
LOCUS AA181556 442 bp mRNA EST 06-JAN-1997
DEFINITION zp51b05.s1 Stratagene HeLa cell s3 937216 Homo sapiens cDNA clone
612945 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA181556
NID g1765022 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa1815 CCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1815 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
40 50 60 70 80 90
t57624.gb_est1
gb_est9:aa081369
LOCUS AA081369 372 bp mRNA EST 01-DEC-1996
DEFINITION zn04c09.s1 Stratagene hNT neuron (#937233) Homo sapiens cDNA clone
546448 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA081369
NID g1623490 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa0813 CATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa0813 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est4:h77406
LOCUS H77406 382 bp mRNA EST 09-NOV-1995
DEFINITION yu08d09.s1 Homo sapiens cDNA clone 233201 3'.
ACCESSION H77406
NID g1055495
KEYWORDS EST.
SOURCE human clone=233201 primer=Promeg -21m13 library=Soares fetal liver . . .
SCORES Init1: 260 Initn: 260 Opt: 261
95.7% identity in 69 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
| ||||||||||||||:||||||||||||||:||||||||
h77406 TANNGTTCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
h77406 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est8:w47407
LOCUS W47407 356 bp mRNA EST 11-OCT-1996
DEFINITION zc35d03.s1 Soares senescent fibroblasts NbHSF Homo sapiens cDNA
clone 324293 3' similar to PIR:S49326 S49326 Nascent polypeptide
associated complex alpha chain - human ;.
ACCESSION W47407
NID g1332204 . . .
SCORES Init1: 260 Initn: 260 Opt: 271
93.3% identity in 75 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||| ||||||||||||||:||||||||||||||:||||||||
w47407 TTTTTCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
w47407 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
t57624.gb_est1
gb_est8:aa102495
LOCUS AA102495 591 bp mRNA EST 28-OCT-1996
DEFINITION zn42e02.s1 Stratagene endothelial cell 937223 Homo sapiens cDNA
clone 550106 3' similar to TR:G556642 G556642 NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT. ;.
ACCESSION AA102495
NID g1647779 . . .
SCORES Init1: 260 Initn: 260 Opt: 260
97.0% identity in 67 bp overlap
10 20 30 40 50 60
t57624 TTTTTTTTTTTTTTTTTTTTTACCAACAAGAAGCCANAACTTTATTTATGANAGAAACAG
||||||||||||||:||||||||||||||:||||||||
aa1024 TCATCCAACAAGAAGCCATAACTTTATTTATGATAGAAACAG
10 20 30 40
70 80 89
t57624 TACAAATTTCAAACCAAGCTGCAGTTACT
|||||||||||||||||||||||||||||
aa1024 TACAAATTTCAAACCAAGCTGCAGTTACTCCTTTGAGACACCAAAAAAAGTTGCTTCCAT
50 60 70 80 90 100
! CPU time used:
! Database scan: 0:42:26.0
! Post-scan processing: 0:00:02.0
! Total CPU time: 0:42:28.0
! Output File: t57624.fasta