Completed Bacteria Genomes collected resources

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A B C D E F H I J K L M N O P Q R S T U V W X Y Z

Acidobacteria bacterium Ellin345

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008009
Total Bases: 5650368 bp
Number of genes: 4834
Released: May 4, 2006.
Modified: May 10, 2006.
Primary publication: Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys.

Acinetobacter sp. ADP1

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005966
Total Bases: 3598621 bp
Number of genes: 3425
Released: Oct 30, 2004 .
Modified: Jan 17, 2006.
Primary publication: Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium.

Aeropyrum pernix K1

Sequenced by: NITE
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000854
Total Bases: 1669695 bp
Number of genes: 1893
Released: Jun 26, 1999.
Modified: Dec 3, 2005.
Primary publication: Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.

Agrobacterium tumefaciens str. C58 Cereon

Sequenced by: Cereon
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003062
Total Bases: 2841581 bp
Number of genes: 2760
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003063
Total Bases: 2074782 bp
Number of genes: 1852
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003064
Total Bases: 542869 bp
Number of genes: 547
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003065
Total Bases: 214233 bp
Number of genes: 201
Released: Dec 18, 2001.
Modified: Dec 2, 2005.
Primary publication: Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.

Agrobacterium tumefaciens str. C58 U. Washington

Sequenced by: University of Washington
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003304
Total Bases: 2841490 bp
Number of genes: 2835
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003305
Total Bases: 2075560 bp
Number of genes: 1899
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003306
Total Bases: 542780 bp
Number of genes: 550
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003308
Total Bases: 214324 bp
Number of genes: 198
Released: Dec 18, 2001.
Modified: Jun 26, 2006.
Primary publication: Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.

Alcanivorax borkumensis SK2

Sequenced by: Bielefeld
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008260
Total Bases: 3120143 bp
Number of genes: 2806
Released: Jul 24, 2006.
Modified: Jul 28, 2006.
Primary publication: Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.

Alkalilimnicola ehrlichei MLHE-1

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008340
Total Bases: 3275944 bp
Number of genes: 2940
Released: Sep 12, 2006.
Modified: Sep 14, 2006.
Primary publication:

Anabaena variabilis ATCC 29413

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007413
Total Bases: 6363727 bp
Number of genes: 5134
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007410
Total Bases: 366354 bp
Number of genes: 350
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007411
Total Bases: 35762 bp
Number of genes: 32
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007412
Total Bases: 300758 bp
Number of genes: 247
Released: Sep 15, 2005.
Modified: Jun 16, 2006.
Primary publication:

Anaeromyxobacter dehalogenans 2CP-C

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007760
Total Bases: 5013479 bp
Number of genes: 4419
Released: Jan 27, 2006.
Modified: Mar 31, 2006.
Primary publication: Characterization and description of Anaeromyxobacter dehalogenans gen. nov., sp. nov., an aryl-halorespiring facultative anaerobic myxobacterium.

Anaplasma marginale str. St. Maries

Sequenced by: Washington State University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004842
Total Bases: 1197687 bp
Number of genes: 1002
Released: Dec 8, 2004.
Modified: Dec 2, 2005.
Primary publication: Complete genome sequencing of Anaplasma marginale reveals that the surface is skewed to two superfamilies of outer membrane proteins.

Anaplasma phagocytophilum HZ

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007797
Total Bases: 1471282 bp
Number of genes: 1411
Released: Feb 21, 2006.
Modified: Mar 30, 2006.
Primary publication: Comparative genomics of emerging human ehrlichiosis agents.

Aquifex aeolicus

Sequenced by: DIVERSA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000918
Total Bases: 1551335 bp
Number of genes: 1580
Released: Apr 16, 1998.
Modified: Dec 02, 2005.
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001880
Total Bases: 39456 bp
Number of genes: 31
Released: Apr 16, 1998.
Modified: Apr 03, 2006.
Primary publication: The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

Archaeoglobus fulgidus DSM 4304

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000917
Total Bases: 2178400 bp
Number of genes: 2486
Released: Dec 6, 1997.
Modified: Jan 17, 2006.
Primary publication: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus

Arthrobacter sp. FB24

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008541
Total Bases: 4698945 bp
Number of genes: 4241
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008537
Total Bases: 159538 bp
Number of genes: 160
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008538
Total Bases: 115507 bp
Number of genes: 108
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008539
Total Bases: 97488 bp
Number of genes: 96
Released: Oct 24, 2006 .
Modified: Oct 25, 2006 .
Primary publication:

Aster yellows witches'-broom phytoplasma AYWB

Sequenced by: Ohio State University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007716
Total Bases: 706569 bp
Number of genes: 706
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007717
Total Bases: 3972 bp
Number of genes: 5
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007718
Total Bases: 4009 bp
Number of genes: 4
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007719
Total Bases: 5104 bp
Number of genes: 7
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007720
Total Bases: 4316 bp
Number of genes: 6
Released: Jan 11, 2006 .
Modified: May 18, 2006 .
Primary publication: Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts.

Azoarcus sp. EbN1

Sequenced by: Max Planck Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006513
Total Bases: 4296230 bp
Number of genes: 4203
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006823
Total Bases: 207355 bp
Number of genes: 274
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006824
Total Bases: 223670 bp
Number of genes: 196
Released: Nov 20, 2004 .
Modified: Jan 17, 2006 .
Primary publication: The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1.

Bacillus anthracis str. 'Ames Ancestor'

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007530
Total Bases: 5227419 bp
Number of genes: 5635
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007323
Total Bases: 94830 bp
Number of genes: 113
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007322
Total Bases: 181677 bp
Number of genes: 217
Released: May 20, 2004 .
Modified: Apr 3, 2006.
Primary publication: Genomics of the Bacillus cereus group of organisms.

Bacillus anthracis str. Ames

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003997
Total Bases: 5227293 bp
Number of genes: 5630
Released: May 2, 2003.
Modified: Dec 2, 2005 .
Primary publication: The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.

Bacillus anthracis str. Sterne

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005945
Total Bases: 5228663 bp
Number of genes: 5415
Released: Jun 24, 2004 .
Modified: Apr 3, 2006.
Primary publication: Genomics of the Bacillus cereus group of organisms.

Bacillus cereus ATCC 10987

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003909
Total Bases: 5224283 bp
Number of genes: 5772
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005707
Total Bases: 208369 bp
Number of genes: 242
Released: Feb 13, 2004 .
Modified: Aug 17, 2006 .
Primary publication: The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1.

Bacillus cereus ATCC 14579

Sequenced by: INRA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004722
Total Bases: 5411809 bp
Number of genes: 5476
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004721
Total Bases: 15274 bp
Number of genes: 21
Released: May 2, 2003.
Modified: Dec 2, 2005.
Primary publication: Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis.

Bacillus cereus E33L

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006274
Total Bases: 5300915 bp
Number of genes: 5269
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007103
Total Bases: 466370 bp
Number of genes: 447
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007104
Total Bases: 5108 bp
Number of genes: 5
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007105
Total Bases: 53501 bp
Number of genes: 57
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007106
Total Bases: 8191 bp
Number of genes: 8
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007107
Total Bases: 9150 bp
Number of genes: 10
Released: Sep 16, 2004.
Modified: DEc 3, 2005.
Primary publication: Genomics of the Bacillus cereus group of organisms.

Bacillus clausii KSM-K16

Sequenced by: Kao Corporation, Biological Science Laboratories, Japan
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006582
Total Bases: 4303871 bp
Number of genes: 4204
Released: Jan 3, 2005.
Modified: Dec 2, 2005.
Primary publication-1: Purification and properties of an alkaline protease from alkalophilic Bacillus sp. KSM-K16.
Primary publication-2: High-resolution crystal structure of M-protease: phylogeny aided analysis of the high-alkaline adaptation mechanism.

Bacillus halodurans C-125

Sequenced by: Japan AMSTEC
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002570
Total Bases: 4202352 bp
Number of genes: 4171
Released: Mar 23, 1999.
Modified: Dec 3, 2005.
Primary publication: 8 publications

Sequenced by: Novozymes Biotech
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006270
Total Bases: 4222334 bp
Number of genes: 4290
Released: Oct 6, 2004.
Modified: Jan 18, 2006.
Primary publication: Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species.

Bacillus licheniformis DSM 13

Sequenced by: Gottingen Genomics Laboratory
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006322
Total Bases: bp
Number of genes:
Released: Sep 24, 2004.
Modified: Dec 3, 2005.
Primary publication: The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential.

Bacillus subtilis subsp. subtilis str. 168

Sequenced by: BSNR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000964
Total Bases: 4214630 bp
Number of genes: 4225
Released: Dec 31, 1997.
Modified: Dec 2, 2005.
Primary publication: The complete genome sequence of the gram-positive bacterium Bacillus subtilis.

Bacillus thuringiensis serovar konkukian str. 97-27

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005957
Total Bases: 5237682 bp
Number of genes: 5261
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006578
Total Bases: 77112 bp
Number of genes: 80
Released: Jun 30, 2004.
Modified: Apr 3, 2006.
Primary publication-1: Bacillus thuringiensis subsp. konkukian (serotype H34) superinfection: case report and experimental evidence of pathogenicity in immunosuppressed mice.
Primary publication-2: Genome differences that distinguish Bacillus anthracis from Bacillus cereus and Bacillus thuringiensis.
Primary publication-3: Fluorescent amplified fragment length polymorphism analysis of Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis isolates.

Bacteroides fragilis NCTC 9434

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003228
Total Bases: 5205140 bp
Number of genes: 4347
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006873
Total Bases: 36560 bp
Number of genes: 48
Released: Mar 3, 2005.
Modified: Dec 3, 2005.
Primary publication: Extensive DNA inversions in the B. fragilis genome control variable gene expression.

Bacteroides fragilis YCH46

Sequenced by: Kitasato University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006347
Total Bases: 5277274 bp
Number of genes: 4670
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006297
Total Bases: 33716 bp
Number of genes: 47
Released: Oct 15, 2004.
Modified: Dec 3, 2005.
Primary publication: Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation.

Bacteroides thetaiotaomicron VPI-5482

Sequenced by: Washington University Department of Molecular
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004663
Total Bases: 6260361 bp
Number of genes: 4864
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004703
Total Bases: 33038 bp
Number of genes: 38
Released: Mar 29, 2003.
Modified: Jan 17, 2006.
Primary publication: A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.

Bartonella henselae str. Houston-1

Sequenced by: Uppsala University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005956
Total Bases: 1931047 bp
Number of genes: 1665
Released: Jun 24, 2004.
Modified: Dec 3, 2005.
Primary publication: The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae.

Bartonella quintana str. Toulouse

Sequenced by: Uppsala University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005955
Total Bases: 1581384 bp
Number of genes: 1356
Released: Jun 24, 2004.
Modified: Dec 3, 2005.
Primary publication: The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae.

Baumannia cicadellinicola str. Hc (Homalodisca coagulata)

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007984
Total Bases: 686194 bp
Number of genes: 651
Released: Apr 27, 2006.
Modified: May 5, 2006.
Primary publication: Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters.

Bdellovibrio bacteriovorus HD100

Sequenced by: Max-Planck-Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005363
Total Bases: bp
Number of genes:
Released: Jan 31, 2004.
Modified: Dec 3, 2005.
Primary publication: A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective.

Bifidobacterium longum NCC2705

Sequenced by: Nestle Research Center, Switzerland
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004307
Total Bases: 2256640 bp
Number of genes: 1798
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004943
Total Bases: 3626 bp
Number of genes: 2
Released: Oct 17, 2002.
Modified: Jan 17, 2006.
Primary publication: The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Bordetella bronchiseptica RB50

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002927
Total Bases: 5339179 bp
Number of genes: 5072
Released: Aug 12, 2003.
Modified: Jan 18, 2006.
Primary publication: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Bordetella parapertussis 12822

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002928
Total Bases: 4773551 bp
Number of genes: 4467
Released: Aug 12, 2003.
Modified: Jan 18, 2006.
Primary publication: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Bordetella pertussis Tohama I

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002929
Total Bases: 4086189 bp
Number of genes: 3867
Released: Aug 12, 2003.
Modified: Jan 18, 2006.
Primary publication: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Borrelia afzelii PKo

Sequenced by: Fritz Lipmann Institute, Germany, Jena
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008277
Total Bases: 905394 bp
Number of genes: 894
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008273
Total Bases: 30017 bp
Number of genes: 43
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008274
Total Bases: 26533 bp
Number of genes: 28
Released: Jul 31, 2006.
Modified: Aug 2, 2006.
Primary publication: Monoclonal antibodies for identification of Borrelia afzelii sp. nov. associated with late cutaneous manifestations of Lyme borreliosis.

Borrelia burgdorferi B31

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001318
Total Bases: 910724 bp
Number of genes: 875
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001904
Total Bases: 9386 bp
Number of genes: 11
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001903
Total Bases: 26498 bp
Number of genes: 29
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000948
Total Bases: 30750 bp
Number of genes: 42
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000949
Total Bases: 30223 bp
Number of genes: 45
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000950
Total Bases: 30299 bp
Number of genes: 44
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000951
Total Bases: 29838 bp
Number of genes: 42
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000952
Total Bases: 30800 bp
Number of genes: 44
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000953
Total Bases: 30885 bp
Number of genes: 43
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000954
Total Bases: 30651 bp
Number of genes: 38
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000957
Total Bases: 5228 bp
Number of genes: 6
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000955
Total Bases: 18753 bp
Number of genes: 12
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000956
Total Bases: 52971 bp
Number of genes: 82
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001849
Total Bases: 16823 bp
Number of genes: 25
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001850
Total Bases: 24177 bp
Number of genes: 32
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001851
Total Bases: 26921 bp
Number of genes: 32
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001852
Total Bases: 29766 bp
Number of genes: 34
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001853
Total Bases: 28601 bp
Number of genes: 40
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001854
Total Bases: 27323 bp
Number of genes: 43
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001855
Total Bases: 36849 bp
Number of genes: 54
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001856
Total Bases: 38829 bp
Number of genes: 52
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001857
Total Bases: 53561 bp
Number of genes: 76
Released: Dec 24, 1997.
Modified: Dec 2, 2005.
Primary publication: Cross-species hybridization of a Borrelia burgdorferi DNA array reveals infection- and culture-associated genes of the unsequenced genome of the relapsing fever agent Borrelia hermsii.

Borrelia garinii PBi

Sequenced by: Institute for Molecular Biotechnology, Germany
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006156
Total Bases: 904246 bp
Number of genes: 869
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006128
Total Bases: 27108 bp
Number of genes: 26
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006129
Total Bases: 55560 bp
Number of genes: 74
Released: Nov 18, 2004.
Modified: Apr 3, 2006.
Primary publication: Comparative analysis of the Borrelia garinii genome.

Bradyrhizobium japonicum USDA 110

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004463
Total Bases: 9105828 bp
Number of genes: 8373
Released: Feb 25, 2003.
Modified: Mar 24, 2006.
Primary publication: Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.

Brucella abortus biovar 1 str. 9-941

Sequenced by: University of Minnesota
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006932
Total Bases: 2124241 bp
Number of genes: 2200
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006933
Total Bases: 1162204 bp
Number of genes: 1156
Released: Apr 5, 2005.
Modified: Jan 18, 2006.
Primary publication: Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis.

Brucella melitensis 16M

Sequenced by: Integrated Genomics
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003317
Total Bases: 2117144 bp
Number of genes: 2107
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003318
Total Bases: 1177787 bp
Number of genes: 1157
Released: Jan 5, 2002.
Modified: Dec 2, 2005.
Primary publication-1: The genome sequence of the facultative intracellular pathogen Brucella melitensis.
Primary publication-2: The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.

Brucella melitensis biovar Abortus 2308

Sequenced by: Oak Ridge National Laboratory
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007618
Total Bases: 2121359 bp
Number of genes: 2236
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007624
Total Bases: 1156948 bp
Number of genes: 1182
Released: Nov 22, 2005.
Modified: Jan 18, 2006.
Primary publication: Whole-genome analyses of speciation events in pathogenic Brucellae.

Brucella suis 1330

Sequenced by: NITE/TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004310
Total Bases: 2107794 bp
Number of genes: 2231
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004311
Total Bases: 1207381 bp
Number of genes: 1220
Released: Sep 25, 2002.
Modified: Dec 2, 2005.
Primary publication: The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.

Buchnera aphidicola str. APS (Acyrthosiphon pisum)

Sequenced by: Rikken GSC, Japan
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002528
Total Bases: 640681 bp
Number of genes: 607
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002253
Total Bases: 7786 bp
Number of genes: 7
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002252
Total Bases: 7258 bp
Number of genes: 4
Released: Sep 19, 2000.
Modified: Jan 9, 2006.
Primary publication: Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS.

Buchnera aphidicola str. Bp (Baizongia pistaciae)

Sequenced by: Valencia University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004545
Total Bases: 615980 bp
Number of genes: 550
Released: Jan 11, 2003.
Modified: Dec 2, 2005.
Primary publication: Reductive genome evolution in Buchnera aphidicola.

Buchnera aphidicola str. Cc (Cinara cedri)

Sequenced by: Valencia University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_00
Total Bases: 416380 bp
Number of genes: 397
Released: Oct 18, 2006.
Modified: Oct 25, 2006.
Primary publication: A small microbial genome: the end of a long symbiotic relationship?

Buchnera aphidicola str. Sg (Schizaphis graminum)

Sequenced by: Uppsala University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004061
Total Bases: 641454 bp
Number of genes: 619
Released: Jun 29, 2002.
Modified: Apr 3, 2006.
Primary publication: 50 million years of genomic stasis in endosymbiotic bacteria.

Burkholderia cenocepacia AU 1054

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008060
Total Bases: 3294563 bp
Number of genes: 3054
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008061
Total Bases: 2788459 bp
Number of genes: 2504
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008062
Total Bases: 1196094 bp
Number of genes: 1074
Released: Jun 1, 2006.
Modified: Jun 5, 2006.
Primary publication:

Burkholderia cenocepacia HI2424

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008542
Total Bases: 3483902 bp
Number of genes: 3238
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008545
Total Bases: 164857 bp
Number of genes: 159
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008543
Total Bases: 2998664 bp
Number of genes: 2707
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008544
Total Bases: 1055417 bp
Number of genes: 927
Released: Oct 25, 2006.
Modified: Oct 26, 2006.
Primary publication: An epidemic Burkholderia cepacia complex strain identified in soil.

Burkholderia cepacia AMMD

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008390
Total Bases: 3556545 bp
Number of genes: 3294
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008391
Total Bases: 2646969 bp
Number of genes: 2364
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008392
Total Bases: 1281472 bp
Number of genes: 1021
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008385
Total Bases: 43581 bp
Number of genes: 45
Released: Sep 21, 2006.
Modified: Sep 27, 2006.
Primary publication: Burkholderia ambifaria sp. nov., a novel member of the Burkholderia cepacia complex including biocontrol and cystic fibrosis-related isolates.

Burkholderia mallei ATCC 23344

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006349
Total Bases: 2325379 bp
Number of genes: 2115
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006348
Total Bases: 3510148 bp
Number of genes: 3394
Released: Sep 21, 2004.
Modified: Jan 18, 2006.
Primary publication: Structural flexibility in the Burkholderia mallei genome.

Burkholderia pseudomallei 1710b

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007434
Total Bases: 4126292 bp
Number of genes: 3799
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007435
Total Bases: 3181762 bp
Number of genes: 2621
Released: Sep 30, 2005.
Modified: Apr 3, 2006.
Primary publication:

Burkholderia pseudomallei K96243

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006350
Total Bases: 4074542 bp
Number of genes: 3529
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006351
Total Bases: 3173005 bp
Number of genes: 2406
Released: Sep 21, 2004.
Modified: Dec 3, 2005.
Primary publication: Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei.

Burkholderia sp. 383

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007509
Total Bases: 1395069 bp
Number of genes: 1221
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007511
Total Bases: 3587082 bp
Number of genes: 3189
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007510
Total Bases: 3694126 bp
Number of genes: 3416
Released: Apr 2, 2004.
Modified: Apr 3, 2006.
Primary publication:

Burkholderia thailandensis E264

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007650
Total Bases: 2914771 bp
Number of genes: 2371
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007651
Total Bases: 3809201 bp
Number of genes: 3343
Released: Dec 15, 2005.
Modified: Jan 18, 2006.
Primary publication: Bacterial genome adaptation to niches: divergence of the potential virulence genes in three Burkholderia species of different survival strategies.

Burkholderia xenovorans LB400

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007952
Total Bases: 3363523 bp
Number of genes: 3046
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007953
Total Bases: 1471779 bp
Number of genes: 1388
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007951
Total Bases: 4895836 bp
Number of genes: 4609
Released: Apr 10, 2006.
Modified: Apr 13, 2006.
Primary publication:

Campylobacter jejuni RM1221

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003912
Total Bases: 1777831 bp
Number of genes: 1937
Released: Jan 7, 2005.
Modified: Dec 2, 2005.
Primary publication: Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species.

Campylobacter jejuni subsp. jejuni NCTC 11168

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002163
Total Bases: 1641481 bp
Number of genes: 1705
Released: Feb 25, 2000.
Modified: Jan 17, 2006.
Primary publication: The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences.

Candidatus Blochmannia floridanus

Sequenced by: University of Valencia
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005061
Total Bases: 705557 bp
Number of genes: 631
Released: Jul 30, 2003.
Modified: Apr 3, 2006.
Primary publication: The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes.

Candidatus Blochmannia pennsylvanicus str. BPEN

Sequenced by: Josephine Bay Paul Center
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007292
Total Bases: 791654 bp
Number of genes: 658
Released: Aug 4, 2005.
Modified: Dec 3, 2005.
Primary publication: Genome sequence of Blochmannia pennsylvanicus indicates parallel evolutionary trends among bacterial mutualists of insects.

Candidatus Carsonella ruddii PV

Sequenced by: Kitasato Institute for Life Sciences
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008512
Total Bases: 159662 bp
Number of genes: 213
Released: Oct 16, 2006.
Modified: Oct 22, 2006.
Primary publication: The 160-kilobase genome of the bacterial endosymbiont Carsonella.

Candidatus Pelagibacter ubique HTCC1062

Sequenced by: Oregon State University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007205
Total Bases: 1308759 bp
Number of genes: 1389
Released: Jul 22, 2005.
Modified: Jan 25, 2006.
Primary publication: Genome streamlining in a cosmopolitan oceanic bacterium.

Candidatus Protochlamydia amoebophila UWE25

Sequenced by: University of Vienna, Austria
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005861
Total Bases: 2414465 bp
Number of genes: 2075
Released: Apr 10, 2004.
Modified: Dec 19, 2005.
Primary publication: lluminating the evolutionary history of chlamydiae.

Carboxydothermus hydrogenoformans Z-2901

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007503
Total Bases: 2401520 bp
Number of genes: 2707
Released: Oct 21, 2005.
Modified: Mar 30, 2006.
Primary publication: Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901.

Caulobacter crescentus CB15

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002696
Total Bases: 4016947 bp
Number of genes: 3819
Released: Mar 22, 2001.
Modified: Jan 20, 2006.
Primary publication: Complete genome sequence of Caulobacter crescentus.

Chlamydia muridarum Nigg

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002620
Total Bases: 1072950 bp
Number of genes: 955
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002182
Total Bases: 7501 bp
Number of genes: 7
Released: Feb 24, 2000.
Modified: Jan 9, 2006.
Primary publication: Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.

Chlamydia trachomatis A/HAR-13

Sequenced by: Lab of Human Bacterial Pathogenesis
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007429
Total Bases: 1044459 bp
Number of genes: 953
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007430
Total Bases: 7510 bp
Number of genes: 8
Released: Sep 23, 2005.
Modified: Mar 30, 2006.
Primary publication: Comparative genomic analysis of Chlamydia trachomatis oculotropic and genitotropic strains.

Chlamydia trachomatis D/UW-3/CX

Sequenced by: Stanford University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000117
Total Bases: 1042519 bp
Number of genes: 940
Released: Oct 23, 1998.
Modified: Jan 18, 2006.
Primary publication: Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis.

Chlamydophila abortus S26/3

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004552
Total Bases: 1144377 bp
Number of genes: 1003
Released: Apr 1, 2005.
Modified: Sep 14, 2006.
Primary publication: The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.

Chlamydophila caviae GPIC

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003361
Total Bases: 1173390 bp
Number of genes: 1053
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004720
Total Bases: 7966 bp
Number of genes: 7
Released: Apr 12, 2003.
Modified: Dec 2, 2005.
Primary publication: Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae.

Chlamydophila felis Fe/C-56

Sequenced by: Japanese Consortium/Yamaguchi University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007899
Total Bases: 1166239 bp
Number of genes: 1046
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007900
Total Bases: 7552 bp
Number of genes: 8
Released: Mar 9, 2006.
Modified: Mar 16, 2006.
Primary publication:

Chlamydophila pneumoniae AR39

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002179
Total Bases: 1229853 bp
Number of genes: 1167
Released: Feb 24, 2000.
Modified: Jan 6, 2006.
Primary publication: Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.

Chlamydophila pneumoniae CWL029

Sequenced by: ChGP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000922
Total Bases: 1230230 bp
Number of genes: <1122/li>
Released: Apr 7, 1999.
Modified: May 3, 2006.
Primary publication: Comparative genomes of Chlamydia pneumoniae and C. trachomatis.

Chlamydophila pneumoniae J138

Sequenced by: Yamaguchi/Kyushu University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002491
Total Bases: 1226565 bp
Number of genes: 1107
Released: Jun 28, 2000.
Modified: Jan 17, 2006.
Primary publication: Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA.

Chlamydophila pneumoniae TW-183

Sequenced by: ALTANA Pharma
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005043
Total Bases: 1225935 bp
Number of genes: 1155
Released: Jul 25, 2003.
Modified: Jan 16, 2006.
Primary publication:

Chlorobium chlorochromatii CaD3

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007514
Total Bases: 2572079 bp
Number of genes: 2047
Released: Oct 26, 2005.
Modified: Mar 30, 2006.
Primary publication: Physiology and tactic response of the phototrophic consortium "Chlorochromatium aggregatum"

Chlorobium tepidum TLS

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002932
Total Bases: 2154946 bp
Number of genes: 2344
Released: Jul 3, 2002.
Modified: Dec 2, 2005.
Primary publication: The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.

Chromobacterium violaceum ATCC 12472

Sequenced by: LNCC, Brazil
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005085
Total Bases: 4751080 bp
Number of genes: 4529
Released: Sep 23, 2003.
Modified: Apr 3, 2006.
Primary publication: The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability.

Chromohalobacter salexigens DSM 3043

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007963
Total Bases: 3696649 bp
Number of genes: 3409
Released: Apr 11, 2006.
Modified: Apr 17, 2006.
Primary publication:

Clostridium acetobutylicum ATCC 824

Sequenced by: Oscient Genome Therapeutics
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003030
Total Bases: 3940880 bp
Number of genes: 3844
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001988
Total Bases: 192000 bp
Number of genes: 178
Released: Jul 24, 2001.
Modified: Jan 18, 2006.
Primary publication: Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum.

Clostridium perfringens ATCC 13124

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008261
Total Bases: 3256683 bp
Number of genes: 3016
Released: Jul 25, 2006.
Modified: Jul 28, 2006.
Primary publication: Molecular genetics and pathogenesis of Clostridium perfringens.

Clostridium perfringens SM101

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008262
Total Bases: 2897393 bp
Number of genes: 2671
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008263
Total Bases: 12397 bp
Number of genes: 10
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008264
Total Bases: 12206 bp
Number of genes: 11
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008265
Total Bases: 38092 bp
Number of genes: 54
Released: Jul 26, 2006.
Modified: Oct 4, 2006.
Primary publication: Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.

Clostridium perfringens str. 13

Sequenced by: University Kyushu
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003366
Total Bases: 3031430bp
Number of genes: 2786
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003042
Total Bases: 54310 bp
Number of genes: 63
Released: Jan 17, 2002.
Modified: Jan 17, 2006.
Primary publication: Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater.

Clostridium tetani E88

Sequenced by: Goettingen Genomics Laboratory
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004557
Total Bases: 2799251 bp
Number of genes: 2445
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004565
Total Bases: 74082 bp
Number of genes: 61
Released: Jan 29, 2003.
Modified: Apr 3, 2006.
Primary publication: The genome sequence of Clostridium tetani, the causative agent of tetanus disease.

Colwellia psychrerythraea 34H

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003910
Total Bases: 5373180 bp
Number of genes: 5054
Released: Jul 26, 2005.
Modified: Jan 17, 2006.
Primary publication: The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.

Corynebacterium diphtheriae NCTC 13129

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002935
Total Bases: 2488635 bp
Number of genes: 2389
Released: Nov 7, 2003.
Modified: Dec 3, 2005.
Primary publication: The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.

Corynebacterium efficiens YS-314

Sequenced by: NITE
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004369
Total Bases: 3147090 bp
Number of genes: 3020
Released: Jul 4, 2003.
Modified: Dec 2, 2005.
Primary publication: Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.

Corynebacterium glutamicum ATCC 13032 Kitasato

Sequenced by: Kitasato University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_00
Total Bases: 3309401 bp
Number of genes: 3074
Released: Sep 2, 2003.
Modified: Jan 6, 2006.
Primary publication: The Corynebacterium glutamicum genome: features and impacts on biotechnological processes.

Corynebacterium glutamicum ATCC 13032 Bielefeld

Sequenced by: Universitaet Bielefeld
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006958
Total Bases: 3282708 bp
Number of genes: 3138
Released: Jan 26, 2004.
Modified: Jan 17, 2006.
Primary publication: The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.

Corynebacterium jeikeium K411

Sequenced by: Bielefeld University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007164
Total Bases: 2462499 bp
Number of genes: 2165
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003080
Total Bases: 14323 bp
Number of genes: 16
Released: Jun 27, 2005.
Modified: Mar 30, 2006.
Primary publication: Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.

Coxiella burnetii RSA 493

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002971
Total Bases: 1995281 bp
Number of genes: 2143
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004704
Total Bases: 37393 bp
Number of genes: 40
Released: Apr 22, 2003.
Modified: Jan 17, 2006.
Primary publication: Complete genome sequence of the Q-fever pathogen Coxiella burnetii.

Cytophaga hutchinsonii ATCC 33406

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008255
Total Bases: 4433218 bp
Number of genes: 3837
Released: Jul 11, 2006.
Modified: Jul 25, 2006.
Primary publication:

Dechloromonas aromatica RCB

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007298
Total Bases: 4501104 bp
Number of genes: 4283
Released: Aug 5, 2005.
Modified: Apr 4, 2006.
Primary publication: Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas.

Dehalococcoides ethenogenes 195

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002936
Total Bases: 1469720 bp
Number of genes: 1642
Released: Jan 7, 2005.
Modified: Apr 3, 2006.
Primary publication: Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes.

Dehalococcoides sp. CBDB1

Sequenced by: Max Planck Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007356
Total Bases: 1395502 bp
Number of genes: 1510
Released: Aug 19, 2005.
Modified: Dec 3, 2005.
Primary publication-1: Bacterial dehalorespiration with chlorinated benzenes.
Primary publication-2: Reductive dehalogenation of chlorinated dioxins by an anaerobic bacterium.

Deinococcus geothermalis DSM 11300

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008025
Total Bases: 2467205 bp
Number of genes: 2411
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008010
Total Bases: 574127 bp
Number of genes: 530
Released: May 4, 2006.
Modified: May 9, 2006.
Primary publication:

Deinococcus radiodurans R1

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001263
Total Bases: 2648638 bp
Number of genes: 2687
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001264
Total Bases: 412348 bp
Number of genes: 369
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000958
Total Bases: 177466 bp
Number of genes: 148
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000959
Total Bases: 45704 bp
Number of genes: 40
Released: Nov 24, 1999.
Modified: Dec 3, 2005.
Primary publication-1: Engineering Deinococcus radiodurans for metal remediation in radioactive mixed waste environments.
Primary publication-2: Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags.
Primary publication-3: Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation.

Desulfitobacterium hafniense Y51

Sequenced by: Research Institute of Innovative
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007907
Total Bases: 5727534 bp
Number of genes: 5137
Released: Mar 9, 2006.
Modified: Apr 3, 2006.
Primary publication: Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195.

Desulfotalea psychrophila LSv54

Sequenced by: e.gene Biotechnologie GmbH
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006138
Total Bases: 3523383 bp
Number of genes: 3204
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006139
Total Bases: 121587 bp
Number of genes: 101
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006140
Total Bases: bp
Number of genes:
Released: Aug 13, 2004.
Modified: Dec 2, 2005.
Primary publication: The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments.

Desulfovibrio desulfuricans G20

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007519
Total Bases: 3730232 bp
Number of genes: 3865
Released: Oct 28, 2005.
Modified: Apr 4, 2006.
Primary publication:

Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002937
Total Bases: 3570858 bp
Number of genes: 3480
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005863
Total Bases: 202301 bp
Number of genes: 153
Released: Apr 13, 2004.
Modified: Jan 17, 2006.
Primary publication: The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough.

Ehrlichia canis str. Jake

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007354
Total Bases: 1315030 bp
Number of genes: 984
Released: Aug 12, 2005.
Modified: Apr 3, 2006.
Primary publication:

Ehrlichia chaffeensis str. Arkansas

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007799
Total Bases: 1176248 bp
Number of genes: 1158
Released: Feb 21, 2006.
Modified: Mar 30, 2006.
Primary publication: Comparative genomics of emerging human ehrlichiosis agents.

Ehrlichia ruminantium str. Gardel

Sequenced by: CIRAD, France
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006831
Total Bases: 1499920 bp
Number of genes: 989
Released: Feb 4, 2005.
Modified: May 23, 2006.
Primary publication: Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity.

Ehrlichia ruminantium Welgevonden

Sequenced by: University of Pretoria, South Africa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005295
Total Bases: 1516355 bp
Number of genes: 961
Released: Feb 4, 2005.
Modified: May 22, 2006.
Primary publication-1: Genome size and genetic map of Cowdria ruminantium
Primary publication-2: The genome of the heartwater agent Ehrlichia ruminantium contains multiple tandem repeats of actively variable copy number.

Enterococcus faecalis V583

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004668
Total Bases: 3218031 bp
Number of genes: 3258
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004669
Total Bases: 66320 bp
Number of genes: 74
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004671
Total Bases: 57660 bp
Number of genes: 62
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004670
Total Bases: 17963 bp
Number of genes: 19
Released: Mar 29, 2003.
Modified: Dec 2, 2005.
Primary publication: Modulation of virulence within a pathogenicity island in vancomycin-resistant Enterococcus faecalis.

Erwinia carotovora subsp. atroseptica SCRI1043

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004547
Total Bases: 5064019 bp
Number of genes: 4614
Released: Jul 21, 2004.
Modified: Dec 2, 2005.
Primary publication: Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.

Erythrobacter litoralis HTCC2594

Sequenced by: The Gordon and Betty Moore Foundation Marine Microbiology
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007722
Total Bases: 3052398 bp
Number of genes: 3056
Released: Jan 11, 2006.
Modified: Mar 30, 2006.
Primary publication: Phylogenetic positions of novel aerobic, bacteriochlorophyll a-containing bacteria and description of Roseococcus thiosulfatophilus gen. nov., sp. nov., Erythromicrobium ramosum gen. nov., sp. nov., and Erythrobacter litoralis sp. nov.

Escherichia coli 536

Sequenced by: University of Goettingen
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008253
Total Bases: 4938920 bp
Number of genes: 4789
Released: Jul 13, 2006.
Modified: Jul 25, 2006.
Primary publication-1: Genetic structure and distribution of four pathogenicity islands (PAI I(536) to PAI IV(536)) of uropathogenic Escherichia coli strain 536.
Primary publication-2: Instability of pathogenicity islands in uropathogenic Escherichia coli 536.
Primary publication-3: The pathogenicity island-associated K15 capsule determinant exhibits a novel genetic structure and correlates with virulence in uropathogenic Escherichia coli strain 536.

Escherichia coli CFT073

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004431
Total Bases: 5231428 bp
Number of genes: 5589
Released: Dec 10, 2002.
Modified: Apr 4, 2006.
Primary publication: Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.

Escherichia coli K12

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000913
Total Bases: 4639675 bp
Number of genes: 4488
Released: Sep 5, 1997.
Modified: Sep 22, 2006.
Primary publication-1: The complete genome sequence of Escherichia coli K-12.
Primary publication-2: Escherichia coli K-12: a cooperatively developed annotation snapshot--2005.

Escherichia coli O157:H7 EDL933

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002655
Total Bases: 5528445 bp
Number of genes: 5453
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007414
Total Bases: 92077 bp
Number of genes: 101
Released: Feb 24, 2001.
Modified: Jul 19, 2006.
Primary publication: Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.

Escherichia coli O157:H7 str. Sakai

Sequenced by: GIRC
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002695
Total Bases: 5498450 bp
Number of genes: 5395
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002128
Total Bases: 92721 bp
Number of genes: 85
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002127
Total Bases: 3306 bp
Number of genes: 3
Released: Mar 29, 2000.
Modified: May 23, 2006.
Primary publication-1: Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.
Primary publication-2: Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak.
Primary publication-3: Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak.
Primary publication-4: Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655.

Escherichia coli UTI89

Sequenced by: Washington University (WashU)
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007946
Total Bases: 5065741 bp
Number of genes: 5176
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007941
Total Bases: 114230 bp
Number of genes: 145
Released: Apr 5, 2006.
Modified: Apr 18, 2006.
Primary publication: Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach.

Escherichia coli W3110

Sequenced by: Nara Institute of Science and Technology
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: AC_000091
Total Bases: 4646332 bp
Number of genes: 4444
Released: Jan 23, 2006.
Modified: Apr 12, 2006.
Primary publication: Nucleotide sequence of the operator-promoter region of the galactose operon of Escherichia coli.

Francisella tularensis subsp. holarctica

Sequenced by: LLNL
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007880
Total Bases: 1895994 bp
Number of genes: 2019
Released: Mar 2, 2006.
Modified: Mar 30, 2006.
Primary publication: Efficacy of the live attenuated Francisella tularensis vaccine (LVS) in a murine model of disease.

Francisella tularensis subsp. holarctica OSU18

Sequenced by: Baylor College of Medicine
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008369
Total Bases: 1895727 bp
Number of genes: 1932
Released: Sep 20, 2006.
Modified: Sep 25, 2006.
Primary publication: Chromosome rearrangement and diversification of Francisella tularensis revealed by the type B (OSU18) genome sequence.

Francisella tularensis subsp. tularensis FSC 198

Sequenced by: University of Birmingham
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008245
Total Bases: 1892616 bp
Number of genes: 1852
Released: Jul 12, 2006.
Modified: Jul 25, 2006.
Primary publication:

Francisella tularensis subsp. tularensis Schu S4

Sequenced by: Swedish Defence Research
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006570
Total Bases: 1892819 bp
Number of genes: 1852
Released: Dec 17, 2004.
Modified: Jan 17, 2006.
Primary publication: Preliminary analysis and annotation of the partial genome sequence of Francisella tularensis strain Schu 4.

Frankia alni ACN14a

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008278
Total Bases: 7497934 bp
Number of genes: 6786
Released: Aug 3, 2006.
Modified: Sep 13, 2006.
Primary publication:

Frankia sp. CcI3

Sequenced by: US DOE Joint Genome Institute (JGI-PGF)
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007777
Total Bases: 5433628 bp
Number of genes: 4618
Released: Feb 6, 2006.
Modified: Mar 30, 2006.
Primary publication:

Fusobacterium nucleatum subsp. nucleatum ATCC 25586

Sequenced by: Integrated Genomics
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003454
Total Bases: 2174500 bp
Number of genes: 2129
Released: Mar 13, 2002.
Modified: Dec 2, 2005.
Primary publication: Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586.

Geobacillus kaustophilus HTA426

Sequenced by: JAMSTEC
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006510
Total Bases: 3544776 bp
Number of genes: 3612
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006509
Total Bases: 47890 bp
Number of genes: 42
Released: Dec 4, 2004.
Modified: Jan 18, 2006.
Primary publication: Genomic characterization of thermophilic Geobacillus species isolated from the deepest sea mud of the Mariana Trench.

Geobacter metallireducens GS-15

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007517
Total Bases: 3997420 bp
Number of genes: 3621
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007515
Total Bases: 13762 bp
Number of genes: 13
Released: Oct 27, 2005.
Modified: Apr 13, 2006.
Primary publication: Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis.

Geobacter sulfurreducens PCA

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002939
Total Bases: 3814139 bp
Number of genes: 3528
Released: Dec 13, 2003.
Modified: Jan 18, 2006.
Primary publication: Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.

Gloeobacter violaceus PCC 7421

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_051250
Total Bases: 4659019 bp
Number of genes: 4482
Released: Nov 19, 2003.
Modified: Dec 3, 2005.
Primary publication-1: Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids.
Primary publication-2: Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids (supplement).

Gluconobacter oxydans 621H

Sequenced by: Gottingen Genom. Lab.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006677
Total Bases: 2702173 bp
Number of genes: 2499
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006672
Total Bases: 163186 bp
Number of genes: 163
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006673
Total Bases: 26568 bp
Number of genes: 29
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006674
Total Bases: 14547 bp
Number of genes: 18
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006675
Total Bases: 13223 bp
Number of genes: 18
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006676
Total Bases: 2687 bp
Number of genes: 4
Released: Jan 24, 2005.
Modified: Dec 3, 2005.
Primary publication: Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans.

Granulibacter bethesdensis CGDNIH1

Sequenced by: Rocky Mountain Laboratories, National Institutes of Allergy and Infectious Disease, The National Institutes of Health
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008343
Total Bases: 2708355 bp
Number of genes: 2498
Released: Sep 13, 2006.
Modified: Sep 15, 2006.
Primary publication: A novel bacterium associated with lymphadenitis in a patient with chronic granulomatous disease.

Haemophilus ducreyi 35000HP

Sequenced by: University Ohio
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002940
Total Bases: 1698955 bp
Number of genes: 1838
Released: Jul 23, 2003.
Modified: Apr 3, 2006.
Primary publication:

Haemophilus influenzae 86-028NP

Sequenced by: Columbus Children's Research Institute and The Ohio State University, Pediatrics, USA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007146
Total Bases: 1913428 bp
Number of genes: 1898
Released: Apr 23, 2004.
Modified: Jan 18, 2006.
Primary publication: Genomic sequence of an otitis media isolate of nontypeable Haemophilus influenzae: comparative study with H. influenzae serotype d, strain KW20.

Haemophilus influenzae Rd KW20

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000907
Total Bases: 1830138 bp
Number of genes: 1788
Released: Jul 28, 1995.
Modified: Dec 13, 2005.
Primary publication: Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.

Haemophilus somnus 129PT

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008309
Total Bases: 2007700 bp
Number of genes: 1867
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006298
Total Bases: 5178 bp
Number of genes: 6
Released: Aug 22, 2006.
Modified: Aug 30, 2006.
Primary publication:

Hahella chejuensis KCTC 2396

Sequenced by: Korea Research Institute of Bioscience and Biotechnology
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007645
Total Bases: 7215267 bp
Number of genes: 6863
Released: Dec 14, 2005.
Modified: Mar 30, 2006.
Primary publication: Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent.

Haloarcula marismortui ATCC 43049

Sequenced by: Institute for Systems Biology
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006396
Total Bases: 3131724 bp
Number of genes: 3186
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006397
Total Bases: 288050 bp
Number of genes: 285
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006389
Total Bases: 33303 bp
Number of genes: 36
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006390
Total Bases: 33452 bp
Number of genes: 42
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006391
Total Bases: 39521 bp
Number of genes: 40
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006392
Total Bases: 50060 bp
Number of genes: 51
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006393
Total Bases: 132678 bp
Number of genes: 131
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006394
Total Bases: 155300 bp
Number of genes: 167
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006395
Total Bases: 155300 bp
Number of genes: 9
Released: Nov 3, 2004.
Modified: Jan 18, 2006.
Primary publication: Low-pass sequencing for microbial comparative genomics.

Halobacterium sp. NRC-1

Sequenced by: University of Massachusetts-Amherst, University of Washington
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002607
Total Bases: 2014239 bp
Number of genes: 2127
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002608
Total Bases: 365425 bp
Number of genes: 371
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001869
Total Bases: 191346 bp
Number of genes: 176
Publications: 10 Publications
Released: Oct 1, 2000.
Modified: Dec 2, 2005.
Primary publication: Genome sequence of Halobacterium species NRC-1.

Haloquadratum walsbyi DSM 16790

Sequenced by: Max Planck Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008212
Total Bases: 3132494 bp
Number of genes: 2875
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008213
Total Bases: 46867 bp
Number of genes: 39
Released: Jun 22, 2006.
Modified: Aug 24, 2006.
Primary publication-1: The genome of the square archaeon Haloquadratum walsbyi : life at the limits of water activity.
Primary publication-2: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=16820057&dopt=Abstract
Primary publication-3: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=16332346&dopt=Abstract
Primary publication-4: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=15560825&dopt=Abstract

Helicobacter acinonychis str. Sheeba

Sequenced by: Penn State University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008229
Total Bases: 1553927 bp
Number of genes: 1654
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008230
Total Bases: 3661 bp
Number of genes: 6
Released: Jun 28, 2006.
Modified: Jul 1, 2006.
Primary publication-1: Helicobacter acinonychis: genetic and rodent infection studies of a Helicobacter pylori-like gastric pathogen of cheetahs and other big cats.
Primary publication-2: Helicobacter acinonyx sp. nov., isolated from cheetahs with gastritis.

Helicobacter hepaticus ATCC 51449

Sequenced by: University Wuerzburg
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004917
Total Bases: 1799146 bp
Number of genes: 1915
Released: Jun 18, 2003.
Modified: Dec 2, 2005.
Primary publication: The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus.

Helicobacter pylori 26695

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000915
Total Bases: 1667867 bp
Number of genes: 1630
Released: Aug 7, 1997.
Modified: Jan 17, 2006.
Primary publication: The complete genome sequence of the gastric pathogen Helicobacter pylori.

Helicobacter pylori HPAG1

Sequenced by: Washington University (WashU)
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008086
Total Bases: 1596366 bp
Number of genes: 1578
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008087
Total Bases: 9370 bp
Number of genes: 8
Released: Jun 6, 2006.
Modified: Jun 23, 2006.
Primary publication: The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression.

Helicobacter pylori J99

Sequenced by: ASTRA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000921
Total Bases: 1643831 bp
Number of genes: 1495
Released: Jan 29, 1999.
Modified: Dec 2, 2005.
Primary publication: Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori.

Hyphomonas neptunium ATCC 15444

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008358
Total Bases: 3705021 bp
Number of genes: 3569
Released: Sep 18, 2006.
Modified: Sep 19, 2006.
Primary publication: Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.

Idiomarina loihiensis L2TR

Sequenced by: University of Hawaii at Manoa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006512
Total Bases: 2839318 bp
Number of genes: 2707
Released: Dec 2, 2004.
Modified: Dec 3, 2005.
Primary publication: Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy.

Jannaschia sp. CCS1

Sequenced by: DOE Joint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007802
Total Bases: 4317977 bp
Number of genes: 4265
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007801
Total Bases: 86072 bp
Number of genes: 71
Released: Feb 27, 2006.
Modified: Mar 30, 2006.
Primary publication:

Lactobacillus acidophilus NCFM

Sequenced by: Cal Poly. San Luis Obispo
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006814
Total Bases: 1993564 bp
Number of genes:
Released: Jan 31, 2005.
Modified: Dec 3, 2005.
Primary publication: Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM.

Lactobacillus brevis ATCC 367

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008497
Total Bases: 2291220 bp
Number of genes: 2314
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008498
Total Bases: 13413 bp
Number of genes: 12
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008499
Total Bases: 35595 bp
Number of genes: 25
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Lactobacillus casei ATCC 334

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008526
Total Bases: 2895264 bp
Number of genes: 2909
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008502
Total Bases: 29061 bp
Number of genes: 20
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008054
Total Bases: 1864998 bp
Number of genes: 2217
Released: May 26, 2006.
Modified: June 13, 2006.
Primary publication: The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution.

Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008529
Total Bases: 1856951 bp
Number of genes: 2040
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Lactobacillus gasseri ATCC 33323

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008530
Total Bases: 1894360 bp
Number of genes: 1898
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: omparative genomics of the lactic acid bacteria.

Lactobacillus johnsonii NCC 533

Sequenced by: Nestle Research Center, Switzerland
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005362
Total Bases: bp
Number of genes:
Released: Feb 18, 2004.
Modified: Feb 6, 2006.
Primary publication: The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533.

Lactobacillus plantarum WCFS1

Sequenced by: Wageningen Centre for Food Sciences
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004567
Total Bases: 3308274 bp
Number of genes: 3136
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006375
Total Bases: 1917 bp
Number of genes: 3
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006376
Total Bases: 2365 bp
Number of genes: 4
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006377
Total Bases: 36069 bp
Number of genes: 43
Released: Feb 5, 2003.
Modified: Jan 9, 2006.
Primary publication: Complete genome sequence of Lactobacillus plantarum WCFS1.

Lactobacillus sakei subsp. sakei 23K

Sequenced by: Institut National de la Recherche Agronomique (INRA)
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007576
Total Bases: 1884661 bp
Number of genes: 1963
Released: Nov 2, 2005.
Modified: Aug 3, 2006.
Primary publication: The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K.

Lactobacillus salivarius subsp. salivarius UCC118

Sequenced by: University College Cork
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007929
Total Bases: 1827111 bp
Number of genes: 1864
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006529
Total Bases: 20417 bp
Number of genes: 27
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006530
Total Bases: 44013 bp
Number of genes: 51
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007930
Total Bases: 242436 bp
Number of genes: 242
Released: Mar 30, 2006.
Modified: May 3, 2006.
Primary publication: Multireplicon genome architecture of Lactobacillus salivarius.

Lactococcus lactis subsp. cremoris SK11

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008527
Total Bases: 2438589 bp
Number of genes: 2610
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008503
Total Bases: 14041 bp
Number of genes: 11
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008504
Total Bases: 9554 bp
Number of genes: 8
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008505
Total Bases: 74750 bp
Number of genes: 65
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008506
Total Bases: 47208 bp
Number of genes: 39
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008507
Total Bases: 14206 bp
Number of genes: 8
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Lactococcus lactis subsp. lactis Il1403

Sequenced by: INRA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002662
Total Bases: 2365589 bp
Number of genes: 2425
Released: May 5, 2001.
Modified: Jan 18, 2006.
Primary publication: Low-redundancy sequencing of the entire Lactococcus lactis IL1403 genome.

Lawsonia intracellularis PHE/MN1-00

Sequenced by: University Minnesota
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008011
Total Bases: 1457619 bp
Number of genes: 1187
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008012
Total Bases: 27048 bp
Number of genes: 29
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008013
Total Bases: 39794 bp
Number of genes: 24
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008014
Total Bases: 194553 bp
Number of genes: 104
Released: May 5, 2006.
Modified: May 9, 2006.
Primary publication:

Legionella pneumophila str. Lens

Sequenced by: Institut Pasteur
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006369
Total Bases: 3345687 bp
Number of genes: 3001
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006366
Total Bases: 59832 bp
Number of genes: 57
Released: Oct 7, 2004.
Modified: Dec 3, 2005.
Primary publication: Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity.

Legionella pneumophila str. Paris

Sequenced by: Institut Pasteur
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006368
Total Bases: 3503610 bp
Number of genes: 3136
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006365
Total Bases: 131885 bp
Number of genes: 142
Released: Oct 7, 2004.
Modified: Dec 3, 2005.
Primary publication: Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity.

Legionella pneumophila subsp. pneumophila str. Philadelphia 1

Sequenced by: Columbia Genome Center
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002942
Total Bases: 3397754 bp
Number of genes: 3002
Released: Sep 28, 2004.
Modified: Sep 20, 2006.
Primary publication-1: The genomic sequence of the accidental pathogen Legionella pneumophila.
Primary publication-2: Legionella effectors that promote nonlytic release from protozoa.
Primary publication-3: Multiple substrates of the Legionella pneumophila Dot/Icm system identified by interbacterial protein transfer.
Primary publication-4: Characterization of a tandem repeat polymorphism in Legionella pneumophila and its use for genotyping.

Leifsonia xyli subsp. xyli str. CTCB07

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006087
Total Bases: 2584158 bp
Number of genes: 2376
Released: Aug 13, 2004.
Modified: Apr 3, 2006.
Primary publication: The genome sequence of the gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli.

Leptospira borgpetersenii serovar Hardjo-bovis JB197

Sequenced by: Monash University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008510
Total Bases: 3576473 bp
Number of genes: 2980
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008511
Total Bases: 299762 bp
Number of genes: 262
Released: Oct 13, 2006.
Modified: Oct 22, 2006.
Primary publication: Genome reduction in Leptospira borgpetersenii reflects limited transmission potential.

Leptospira borgpetersenii serovar Hardjo-bovis L550

Sequenced by: Monash University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008508
Total Bases: 3614446bp
Number of genes: 3003
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008509
Total Bases: 317336 bp
Number of genes: 270
Released: Oct 13, 2006.
Modified: Oct 22, 2006.
Primary publication: Genome reduction in Leptospira borgpetersenii reflects limited transmission potential.

Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005823
Total Bases: 4277185bp
Number of genes: 3481
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005824
Total Bases: 350181 bp
Number of genes: 272
Released: Mar 19, 2004.
Modified: Apr 3, 2006.
Primary publication: Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis.

Leptospira interrogans serovar Lai str. 56601

Sequenced by: Chinese National HGC, Shanghai
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004342
Total Bases: 4332241 bp
Number of genes: 4401
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004343
Total Bases: 358943 bp
Number of genes: 367
Released: Apr 25, 2003.
Modified: Jul 19, 2006.
Primary publication: Unique physiological and pathogenic features of Leptospira interrogans revealed by whole-genome sequencing.

Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008531
Total Bases: 2038396 bp
Number of genes: 2073
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008496
Total Bases: 37367 bp
Number of genes: 35
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Listeria innocua Clip11262

Sequenced by: Institut Pasteur
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003212
Total Bases: 3011208 bp
Number of genes: 3065
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003383
Total Bases: 81905 bp
Number of genes: 80
Released: Oct 27, 2001.
Modified: Dec 3, 2005.
Primary publication: Comparative genomics of Listeria species.
Publication-1: New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays.
Publication-2: Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA.

Listeria monocytogenes EGD-e

Sequenced by: European Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003210
Total Bases: 2944528 bp
Number of genes: 2940
Released: Oct 27, 2001.
Modified: Dec 2, 2005.
Primary publication: Comparative genomics of Listeria species.
Publication-1: New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays.
Publication-2: Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA.

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002973
Total Bases: 2905187 bp
Number of genes: 2934
Released: Apr 30, 2004.
Modified: Aug 31, 2006.
Primary publication: Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species.
Publication: New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays.

Listeria welshimeri serovar 6b str. SLCC5334

Sequenced by: Universitat Giessen
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008555
Total Bases: 2814130 bp
Number of genes: 2864
Released: Oct 27, 2006.
Modified: Oct 31, 2006.
Primary publication: Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes.

Magnetospirillum magneticum AMB-1

Sequenced by: Tokyo University of Agriculture and Technology, Japan

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007626
Total Bases: 4967148 bp
Number of genes: 4563
Released: Dec 1, 2005.
Modified: Apr 3, 2006.
Primary publication: Complete Genome Sequence of the Facultative Anaerobic Magnetotactic Bacterium Magnetospirillum sp. strain AMB-1.

Mannheimia succiniciproducens MBEL55E

Sequenced by: Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006300
Total Bases: 2314078 bp
Number of genes: 2459
Released: Sep 21, 2004.
Modified: Dec 2, 2005.
Primary publication: The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens.

Maricaulis maris MCS10

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008347
Total Bases: 3368780 bp
Number of genes: 3133
Released: Sep 14, 2006.
Modified: Sep 16, 2006.
Primary publication:

Mesoplasma florum L1

Sequenced by: Broad Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006055
Total Bases: 793224 bp
Number of genes: 717
Released: Jul 19, 2004.
Modified: Dec 3, 2005.
Primary publication:

Mesorhizobium loti MAFF303099

Sequenced by: Kazusa

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002678
Total Bases: 7036071 bp
Number of genes: 6804
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002679
Total Bases: 351911 bp
Number of genes: 320
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002682
Total Bases: 208315 bp
Number of genes: 209
Released: Feb 24, 2001.
Modified: Dec 3, 2005.
Primary publication: Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.

Mesorhizobium sp. BNC1

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008254
Total Bases: 4412446 bp
Number of genes: 4170
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008242
Total Bases: 343931 bp
Number of genes: 343
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008243
Total Bases: 131247 bp
Number of genes: 122
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008244
Total Bases: 47561 bp
Number of genes: 49
Released: Jul 11, 2006.
Modified: Jul 25, 2006.
Primary publication:

Methanocaldococcus jannaschii DSM 2661

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000909
Total Bases: 1664970 bp
Number of genes: 1772
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001732
Total Bases: 58407 bp
Number of genes: 46
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001733
Total Bases: 16550 bp
Number of genes: 12
Released: Aug 23, 1996.
Modified: Dec 3, 2005.
Primary publication: Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.

Methanococcoides burtonii DSM 6242

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007955
Total Bases: 2575032 bp
Number of genes: 2497
Released: Apr 10, 2006.
Modified: Apr 13, 2006.
Primary publication:

Methanococcus maripaludis S2

Sequenced by: University of Washington

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005791
Total Bases: 1661137 bp
Number of genes: 1772
Released: Oct 7, 2004.
Modified: Jan 18, 2006.
Primary publication: Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis.

Methanopyrus kandleri AV19

Sequenced by: Fidelity Systems

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003551
Total Bases: 1694969 bp
Number of genes: 1729
Released: Apr 4, 2002.
Modified: Dec 2, 2005.
Primary publication: The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens.

Methanosaeta thermophila PT

Sequenced by: US DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008553
Total Bases: 1879471bp
Number of genes: 1781
Released: Oct 25, 2006.
Modified: Oct 28, 2006.
Primary publication:

Methanosarcina acetivorans C2A

Sequenced by: Broad Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003552
Total Bases: 5751492 bp
Number of genes: 4721
Released: Apr 5, 2002.
Modified: Jan 17, 2006.
Primary publication: The genome of M. acetivorans reveals extensive metabolic and physiological diversity.

Methanosarcina barkeri str. fusaro

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007355
Total Bases: 4837408 bp
Number of genes: 3811
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007355
Total Bases: 4837408 bp
Number of genes: 3811
Released: Aug 12, 2005.
Modified: Jan 23, 2006.
Primary publication:

Methanosarcina mazei Go1

Sequenced by: Goettingen Genomics Laboratory

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003901
Total Bases: 4096345 bp
Number of genes: 3437
Released: Jul 20, 2002.
Modified: Jan 23, 2006.
Primary publication: The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea.

Methanosphaera stadtmanae DSM 3091

Sequenced by: University of Goettingen

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007681
Total Bases: 1767403 bp
Number of genes: 1588
Released: Jan 5, 2006.
Modified: Mar 30, 2006.
Primary publication: The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis.

Methanospirillum hungatei JF-1

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007796
Total Bases: 3544738 bp
Number of genes: 3304
Released: Feb 17, 2006.
Modified: Mar 30, 2006.
Primary publication:

Methanothermobacter thermautotrophicus str. Delta H

Sequenced by: Genome Therapeutics Corporation

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000916
Total Bases: 1751377 bp
Number of genes: 1920
Released: Nov 26, 1997.
Modified: Dec 2, 2005.
Primary publication: Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics.

Methylobacillus flagellatus KT

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007947
Total Bases: 2971517 bp
Number of genes: 2822
Released: Apr 10, 2006.
Modified: Apr 13, 2006.
Primary publication:

Methylococcus capsulatus str. Bath

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002977
Total Bases: 3304561 bp
Number of genes: 3056
Released: Sep 24, 2004.
Modified: Apr 3, 2006.
Primary publication: Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath).

Moorella thermoacetica ATCC 39073

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007644
Total Bases: 2628784 bp
Number of genes: 2615
Released: Dec 12, 2005.
Modified: Apr 4, 2006.
Primary publication:

Mycobacterium avium subsp. paratuberculosis K-10

Sequenced by: Univ. Minnesota

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002944
Total Bases: 4829781 bp
Number of genes: 4398
Released: Jan 30, 2004.
Modified: Jan 18, 2006.
Primary publication: The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.

Mycobacterium bovis AF2122/97

Sequenced by: Sanger Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002945
Total Bases: 4345492 bp
Number of genes: 4003
Released: Jun 6, 2003.
Modified: Jun 7, 2006.
Primary publication: The complete genome sequence of Mycobacterium bovis.

Mycobacterium leprae TN

Sequenced by: Sanger Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002677
Total Bases: 3268203 bp
Number of genes: 2770
Released: Mar 10, 2001.
Modified: Dec 3, 2005.
Primary publication: Massive gene decay in the leprosy bacillus.

Mycobacterium sp. MCS

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008146
Total Bases: 5705448 bp
Number of genes: 5473
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008147
Total Bases: 215075 bp
Number of genes: 225
Released: Jun 9, 2006.
Modified: Jun 13, 2006.
Primary publication: Isolation and characterization of polycyclic aromatic hydrocarbon-degrading Mycobacterium isolates from soil.

Mycobacterium tuberculosis CDC1551

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002755
Total Bases: 4403837 bp
Number of genes: 4293
Released: Sep 10, 2002.
Modified: Jan 17, 2006.
Primary publication: Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.

Mycobacterium tuberculosis H37Rv

Sequenced by: Sanger Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000962
Total Bases: 4411532 bp
Number of genes: 4048
Released: Jun 20, 1998.
Modified: Jan 17, 2006.
Primary publication-1: Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.
Primary publication-2: Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv.

Mycoplasma capricolum subsp. capricolum ATCC 27343

Sequenced by: J. Craig Venter Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007633
Total Bases: 1010023 bp
Number of genes: 867
Released: Dec 6, 2005.
Modified: Mar 30, 2006.
Primary publication:

Mycoplasma gallisepticum R

Sequenced by: Univ. Connecticut

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004829
Total Bases: 996422 bp
Number of genes: 781
Released: Sep 2, 2003.
Modified: Dec 2, 2005.
Primary publication: The complete genome sequence of the avian pathogen Mycoplasma gallisepticum strain R(low).

Mycoplasma genitalium G37

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000908
Total Bases: 580076 bp
Number of genes: 525
Released: Oct 20, 1995.
Modified: Jul 3, 2006.
Primary publication-1: The minimal gene complement of Mycoplasma genitalium.
Primary publication-2: A survey of the Mycoplasma genitalium genome by using random sequencing.
Primary publication-3: Characterization of repetitive DNA in the Mycoplasma genitalium genome: possible role in the generation of antigenic variation.

Mycoplasma hyopneumoniae 232

Sequenced by: Iowa State University

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006360
Total Bases: bp
Number of genes:
Released: Oct 19, 2004.
Modified: Jan 9, 2006.
Primary publication: he genome sequence of Mycoplasma hyopneumoniae strain 232, the agent of swine mycoplasmosis.

Mycoplasma hyopneumoniae 7448

Sequenced by: LNCC - Laboratorio Nacional de

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007332
Total Bases: 920079 bp
Number of genes: 711
Released: Aug 8, 2005.
Modified: Dec 3, 2005.
Primary publication: Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae.

Mycoplasma hyopneumoniae J

Sequenced by: LNCC - Laboratorio Nacional de Computacao Cientifica

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007295
Total Bases: 897405 bp
Number of genes: 709
Released: Aug 5, 2005.
Modified: Dec 3, 2005.
Primary publication: Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae.

Mycoplasma mobile 163K

Sequenced by: Broad Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006908
Total Bases: 777079 bp
Number of genes: 667
Released: Aug 4, 2004.
Modified: Aug 3, 2006.
Primary publication: The complete genome and proteome of Mycoplasma mobile.

Mycoplasma mycoides subsp. mycoides SC str. PG1

Sequenced by: Royal Institute of Technology, Stockholm, Sweden

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005364
Total Bases: 1211703 bp
Number of genes: 1052
Released: Feb 6, 2004.
Modified: Apr 3, 2006.
Primary publication: The genome sequence of Mycoplasma mycoides subsp. mycoides SC type strain PG1T, the causative agent of contagious bovine pleuropneumonia (CBPP).

Mycoplasma penetrans HF-2

Sequenced by: NIID Japan

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004432
Total Bases: 1358633 bp
Number of genes: 1069
Released: Dec 6, 2002.
Modified: Jun 7, 2006.
Primary publication: The complete genomic sequence of Mycoplasma penetrans, an intracellular bacterial pathogen in humans.

Mycoplasma pneumoniae M129

Sequenced by: Heidelberg University

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000912
Total Bases: 816394 bp
Number of genes: 733
Released: Nov 15, 1996.
Modified: Jan 18, 2006.
Primary publication-1: Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae.
Primary publication-2: Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames.

Mycoplasma pulmonis UAB CTIP

Sequenced by: Genoscope

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002771
Total Bases: 963879 bp
Number of genes: 814
Released: May 23, 2001.
Modified: Jun 7, 2006.
Primary publication: The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis.

Mycoplasma synoviae 53

Sequenced by: LNCC - Laboratorio Nacional de Computacao Cientifica

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007294
Total Bases: 799476 bp
Number of genes: 728
Released: Aug 5, 2005.
Modified: Mar 30, 2006.
Primary publication: Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae.

Myxococcus xanthus DK 1622

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008095
Total Bases: 9139763 bp
Number of genes: 7456
Released: Jun 7, 2006.
Modified: Jun 9, 2006.
Primary publication:

Nanoarchaeum equitans Kin4-M

Sequenced by: DIVERSA

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005213
Total Bases: 490885 bp
Number of genes: 582
Released: Oct 21, 2003.
Modified: Dec 2, 2005.
Primary publication: The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism.

Natronomonas pharaonis DSM 2160

Sequenced by: Max Planck Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007426
Total Bases: 2595221 bp
Number of genes: 2726
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007427
Total Bases: 130989 bp
Number of genes: 132
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007428
Total Bases: 23486 bp
Number of genes: 36
Released: Sep 28, 2005.
Modified: Jan 18, 2006.
Primary publication: Living with two extremes: conclusions from the genome sequence of Natronomonas pharaonis.

Neisseria gonorrhoeae FA 1090

Sequenced by: Univ. Oklahoma

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002946
Total Bases: 2153922 bp
Number of genes: 2069
Released: Feb 14, 2005.
Modified: Jan 18, 2006.
Primary publication:

Neisseria meningitidis MC58

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003112
Total Bases: 2272360 bp
Number of genes: 2225
Released: Mar 10, 2000.
Modified: Jan 17, 2006.
Primary publication: Inventory of the proteins in Neisseria meningitidis serogroup B strain MC58.

Neisseria meningitidis Z2491

Sequenced by: Sanger Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003116
Total Bases: 2184406 bp
Number of genes: 2193
Released: Apr 13, 2000.
Modified: Jan 17, 2006.
Primary publication: Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491.

Neorickettsia sennetsu str. Miyayama

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007798
Total Bases: 859006 bp
Number of genes: 973
Released: Feb 21, 2006.
Modified: Mar 30, 2006.
Primary publication: Comparative genomics of emerging human ehrlichiosis agents.

Nitrobacter hamburgensis X14

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007964
Total Bases: 4406967 bp
Number of genes: 4107
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007959
Total Bases: 294829 bp
Number of genes: 314
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007960
Total Bases: 188318 bp
Number of genes: 185
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007961
Total Bases: 121408 bp
Number of genes: 135
Released: Apr 11, 2006.
Modified: Apr 17, 2006.
Primary publication:

Nitrobacter winogradskyi Nb-255

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007406
Total Bases: 3402093 bp
Number of genes: 3198
Released: Sep 12, 2005.
Modified: Oct 19, 2006.
Primary publication: Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255.

Nitrosococcus oceani ATCC 19707

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007484
Total Bases: 3481691 bp
Number of genes: 3143
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007483
Total Bases: 40420 bp
Number of genes: 43
Released: Oct 4, 2005.
Modified: Mar 31, 2006.
Primary publication:

Nitrosomonas europaea ATCC 19718

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004757
Total Bases: 2812094 bp
Number of genes: 2620
Released: Apr 18, 2003.
Modified: Apr 3, 2006.
Primary publication: Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea.

Nitrosomonas eutropha C71

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008344
Total Bases: 2661057 bp
Number of genes: 2577
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008341
Total Bases: 65132 bp
Number of genes: 56
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008342
Total Bases: 55635 bp
Number of genes: 53
Released: Sep 13, 2006.
Modified: Sep 15, 2006.
Primary publication:

Nitrosospira multiformis ATCC 25196

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007614
Total Bases: 3184243 bp
Number of genes: 2828
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007615
Total Bases: 18871 bp
Number of genes: 17
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007616
Total Bases: 17036 bp
Number of genes: 16
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007617
Total Bases: 14159 bp
Number of genes: 15
Released: Nov 15, 2005.
Modified: Mar 31, 2006.
Primary publication:

Nocardia farcinica IFM 10152

Sequenced by: Department of Bioactive Molecules, National Institute of Infectious Diseases

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006361
Total Bases: 6021225 bp
Number of genes: 5747
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006362
Total Bases: 184026 bp
Number of genes: 160
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006363
Total Bases: 87093 bp
Number of genes: 93
Released: Oct 7, 2004.
Modified: Dec 3, 2005.
Primary publication: The complete genomic sequence of Nocardia farcinica IFM 10152.

Nostoc sp. PCC 7120

Sequenced by: Kazusa

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003272
Total Bases: 6413771 bp
Number of genes: 5431
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003276
Total Bases: 408101 bp
Number of genes: 386
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003240
Total Bases: 186614 bp
Number of genes: 186
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003267
Total Bases: 101965 bp
Number of genes: 90
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003273
Total Bases: 55414 bp
Number of genes: 85
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003270
Total Bases: 40340 bp
Number of genes: 31
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003241
Total Bases: 5584 bp
Number of genes: 5
Released: Jan 5, 2002.
Modified: Jan 9, 2006.
Primary publication: Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120.

Novosphingobium aromaticivorans DSM 12444

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007794
Total Bases: 3561584 bp
Number of genes: 3412
Released: Feb 10, 2006.
Modified: Mar 30, 2006.
Primary publication:

Oceanobacillus iheyensis HTE831

Sequenced by: JAMSTEC

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004193
Total Bases: 3630528 bp
Number of genes: 3594
Released: Dec 26, 2001.
Modified: Dec 2, 2005.
Primary publication-1: Oceanobacillus iheyensis gen. nov., sp. nov., a deep-sea extremely halotolerant and alkaliphilic species isolated from a depth of 1050 m on the Iheya Ridge.
Primary publication-2: Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments.

Oenococcus oeni PSU-1

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008528
Total Bases: 1780517 bp
Number of genes: 1864
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Onion yellows phytoplasma OY-M

Sequenced by: The University of Tokyo, Japan

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005303
Total Bases: 860631 bp
Number of genes: 793
Released: Dec 9, 2003.
Modified: Dec 3, 2005.
Primary publication: Reductive evolution suggested from the complete genome sequence of a plant-pathogenic phytoplasma.

Pasteurella multocida subsp. multocida str. Pm70

Sequenced by: Univ. Minnesota

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002663
Total Bases: 2257487 bp
Number of genes: 2092
Released: Mar 15, 2001.
Modified: Dec 3, 2005.
Primary publication: Complete genomic sequence of Pasteurella multocida, Pm70.

Pediococcus pentosaceus ATCC 25745

Sequenced by: US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008525
Total Bases: 1832387 bp
Number of genes: 1847
Released: Oct 13, 2006.
Modified: Oct 31, 2006.
Primary publication: Comparative genomics of the lactic acid bacteria.

Pelobacter carbinolicus DSM 2380

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007498
Total Bases: 3665893 bp
Number of genes: 3451
Released: Oct 12, 2005.
Modified: Nov 1, 2006.
Primary publication:

Pelodictyon luteolum DSM 273

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007512
Total Bases: 2364842 bp
Number of genes: 2137
Released: Oct 26, 2005.
Modified: Mar 31, 2006.
Primary publication:

Photobacterium profundum SS9

Sequenced by: University of Padova, Italy

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006370
Total Bases: 4085304 bp
Number of genes: 3603
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006371
Total Bases: 2237943 bp
Number of genes: 2030
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005871
Total Bases: 80033 bp
Number of genes: 67
Released: Apr 30, 2004.
Modified: Jan 18, 2006.
Primary publication: Photobacterium profundum sp. nov., a new, moderately barophilic bacterial species isolated from a deep-sea sediment.

Photorhabdus luminescens subsp. laumondii TTO1

Sequenced by: Institut Pasteur

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005126
Total Bases: 5688987 bp
Number of genes: 5012
Released: Oct 7, 2003.
Modified: Dec 3, 2005.
Primary publication: The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens.

Picrophilus torridus DSM 9790

Sequenced by: Institut of Microbiology and Genetics, University of Goettingen

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005877
Total Bases: 1545895 bp
Number of genes: 1581
Released: Jun 9, 2004.
Modified: Dec 3, 2005.
Primary publication: Genome sequence of Picrophilus torridus and its implications for life around pH 0.

Polaromonas sp. JS666

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007948
Total Bases: 5200264 bp
Number of genes: 4962
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007949
Total Bases: 360405 bp
Number of genes: 341
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007950
Total Bases: 338007 bp
Number of genes: 323
Released: Apr 10, 2006.
Modified: Apr 13, 2006.
Primary publication: Biodegradation of cis-dichloroethene as the sole carbon source by a beta-proteobacterium.

Porphyromonas gingivalis W83

Sequenced by: Porphyromonas gingivalis Genome Project

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002950
Total Bases: 2343476 bp
Number of genes: 2015
Released: Sep 2, 2003.
Modified: Jan 18, 2006.
Primary publication: Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83.

Prochlorococcus marinus str. MIT 9312

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007577
Total Bases: 1709204 bp
Number of genes: 1856
Released: Nov 2, 2005.
Modified: Jun 16, 2006.
Primary publication:

Prochlorococcus marinus str. MIT 9313

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005071
Total Bases: 2410873 bp
Number of genes: 2330
Released: Aug 15, 2003.
Modified: Jun 16, 2006.
Primary publication: Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.

Prochlorococcus marinus str. NATL2A

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007335
Total Bases: 1842899 bp
Number of genes: 1940
Released: Aug 9, 2005.
Modified: Jun 16, 2006.
Primary publication:

Prochlorococcus marinus subsp. marinus str. CCMP1375

Sequenced by: CNRS

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005042
Total Bases: 1751080 bp
Number of genes: 1930
Released: Aug 15, 2003.
Modified: Jul 24, 2006.
Primary publication: Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.

Prochlorococcus marinus subsp. pastoris str. CCMP1986

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005072
Total Bases: 1657990 bp
Number of genes: 1763
Released: Aug 15, 2003.
Modified: Jun 15, 2006.
Primary publication: Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.

Propionibacterium acnes KPA171202

Sequenced by: Gottingen Genom. Lab.

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006085
Total Bases: 2560265 bp
Number of genes: 2368
Released: Aug 3, 2004.
Modified: Apr 3, 2006.
Primary publication: The complete genome sequence of Propionibacterium acnes, a commensal of human skin.

Pseudoalteromonas atlantica T6c

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008228
Total Bases: 5187005 bp
Number of genes: 4397
Released: Jun 28, 2006.
Modified: Jun 30, 2006.
Primary publication:

Pseudoalteromonas haloplanktis TAC125

Sequenced by: CNRS

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007481
Total Bases: 3214944 bp
Number of genes: 3075
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007482
Total Bases: 635328 bp
Number of genes: 546
Released: Oct 3, 2005.
Modified: Jan 20, 2006.
Primary publication-1: Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations.
Primary publication-2: Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125.

Pseudomonas aeruginosa PAO1

Sequenced by: PathoGenesis Corporation

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002516
Total Bases: 6264404 bp
Number of genes: 5651
Released: Sep 13, 2000.
Modified: Aug 3, 2000.
Primary publication: Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen.

Pseudomonas aeruginosa UCBPP-PA14

Sequenced by: Massachusetts General Hospital

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008463
Total Bases: bp
Number of genes:
Released: Oct 6, 2006.
Modified: Oct 13, 2006.
Primary publication: Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial.

Pseudomonas entomophila L48

Sequenced by: Genoscope

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008027
Total Bases: 5888780 bp
Number of genes: 5275
Released: May 10, 2006.
Modified: May 31, 2006.
Primary publication: Drosophila host defense after oral infection by an entomopathogenic Pseudomonas species.

Pseudomonas fluorescens Pf-5

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004129
Total Bases: 7074893 bp
Number of genes: 6231
Released: Jun 30, 2005.
Modified: Apr 3, 2006.
Primary publication: Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.

Pseudomonas fluorescens PfO-1

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007492
Total Bases: 6438405 bp
Number of genes: 5833
Released: Oct 7, 2005.
Modified: Apr 4, 2006.
Primary publication:

Sequenced by:

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_00
Total Bases: bp
Number of genes:
Released: , .
Modified: , .
Primary publication:

Pseudomonas putida KT2440

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002947
Total Bases: 6181863 bp
Number of genes: 5516
Released: Jan 22, 2003.
Modified: Aug 17, 2006.
Primary publication: Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440

Pseudomonas syringae pv. phaseolicola 1448A

Sequenced by: Cornell University

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005773
Total Bases: 5928787 bp
Number of genes: 5225
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007274
Total Bases: 131950 bp
Number of genes: 149
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007275
Total Bases: 51711 bp
Number of genes: 60
Released: Aug 1, 2005.
Modified: Aug 9, 2006.
Primary publication: Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.

Pseudomonas syringae pv. syringae B728a

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007005
Total Bases: 6093698bp
Number of genes: 5220
Released: May 12, 2005.
Modified: Aug 17, 2006.
Primary publication: Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.

Pseudomonas syringae pv. tomato str. DC3000

Sequenced by: TIGR

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004578
Total Bases: 6397126 bp
Number of genes: 5697
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004632
Total Bases: 67473 bp
Number of genes: 77
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004633
Total Bases: 73661 bp
Number of genes: 73
Released: Aug 21, 2003.
Modified: Oct 6, 2006.
Primary publication: The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.

Psychrobacter arcticus 273-4

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007204
Total Bases: 2650701 bp
Number of genes: 2211
Released: Jul 20, 2005.
Modified: Jan 18, 2006.
Primary publication:

Psychrobacter cryohalolentis K5

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007969
Total Bases: 3059876 bp
Number of genes: 2537
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007968
Total Bases: 41221 bp
Number of genes: 44
Released: Apr 18, 2006.
Modified: Apr 20, 2006.
Primary publication: Reproduction and metabolism at - 10 degrees C of bacteria isolated from Siberian permafrost.

Pyrobaculum aerophilum str. IM2

Sequenced by: UCLA/CalTech

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003364
Total Bases: 2222430 bp
Number of genes: 2706
Released: Jan 17, 2002.
Modified: Dec 2, 2005.
Primary publication: Genome sequence of the hyperthermophilic crenarchaeon Pyrobaculum aerophilum.

Pyrococcus abyssi GE5

Sequenced by: Genoscope

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000868
Total Bases: 1765118 bp
Number of genes: 1993
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001773
Total Bases: 3444 bp
Number of genes: 2
Released: Jun 1, 2001.
Modified: Dec 13, 2005.
Primary publication-1: An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.
Primary publication-2: Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes.
Primary publication-3: Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea.

Pyrococcus furiosus DSM 3638

Sequenced by: Utah Genome Center

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003413
Total Bases: 1908256 bp
Number of genes: 2228
Released: Aug 3, 1999.
Modified: Dec 2, 2005.
Primary publication-1: Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences.
Primary publication-2: Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology.

Pyrococcus horikoshii OT3

Sequenced by: NITE

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000961
Total Bases: 1738505 bp
Number of genes: 2005
Released: Jul 29, 1998.
Modified: Aug 3, 2006.
Primary publication-1: Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3.
Primary publication-2: Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3 (supplement).

Ralstonia eutropha H16

Sequenced by: Gottingen Genom. Lab.

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008313
Total Bases: 4052032 bp
Number of genes: 3711
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008314
Total Bases: 2912490 bp
Number of genes: 2568
Released: Aug 30, 2006.
Modified: Oct 26, 2006.
Primary publication:

Ralstonia eutropha JMP134

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007347
Total Bases: 3806533 bp
Number of genes: 3529
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007348
Total Bases: 2726152bp
Number of genes: 2442
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007336
Total Bases: 634917 bp
Number of genes: 555
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007337
Total Bases: 87688 bp
Number of genes: 90
Released: Aug 10, 2005.
Modified: Mar 30, 2006.
Primary publication:

Ralstonia metallidurans CH34

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007973
Total Bases: 3928089bp
Number of genes: 3680
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007974
Total Bases: 2580084bp
Number of genes: 2341
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007971
Total Bases: 233720 bp
Number of genes: 241
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007972
Total Bases: 171459 bp
Number of genes: 164
Released: Apr 26, 2006.
Modified: Apr 27, 2006.
Primary publication:

Ralstonia solanacearum GMI1000

Sequenced by: Genoscope

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003295
Total Bases: 3716413 bp
Number of genes: 3509
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003296
Total Bases: 2094509 bp
Number of genes: 1685
Released: Feb 2, 2002.
Modified: Jan 18, 2006.
Primary publication: Genome sequence of the plant pathogen Ralstonia solanacearum.

Sequenced by: Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007761
Total Bases: 4381608 bp
Number of genes: 4126
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007762
Total Bases: 194229 bp
Number of genes: 182
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007763
Total Bases: 184338 bp
Number of genes: 165
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007764
Total Bases: 250948 bp
Number of genes: 234
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004041
Total Bases: 371254 bp
Number of genes: 354
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007765
Total Bases: 505334 bp
Number of genes: 459
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007766
Total Bases: 642517 bp
Number of genes: 573
Released: Feb 1, 2006.
Modified: Mar 10, 2006.
Primary publication: The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.

Rhizobium leguminosarum bv. viciae 3841

Sequenced by: Sanger Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008378
Total Bases: 870021 bp
Number of genes: 789
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008380
Total Bases: 5057142 bp
Number of genes: 4800
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008379
Total Bases: 352782 bp
Number of genes: 313
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008381
Total Bases: 488135 bp
Number of genes: 471
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008382
Total Bases: 151564 bp
Number of genes: 188
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008383
Total Bases: 147463 bp
Number of genes: 142
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008384
Total Bases: 684202 bp
Number of genes: 644
Released: Sep 20, 2006.
Modified: Oct 19, 2006.
Primary publication:

Rhodobacter sphaeroides 2.4.1

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007493
Total Bases: 3188609 bp
Number of genes: 3092
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007494
Total Bases: 943016 bp
Number of genes: 865
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007488
Total Bases: 114178 bp
Number of genes: 102
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007489
Total Bases: 105284 bp
Number of genes: 90
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007490
Total Bases: 100828 bp
Number of genes: 98
Released: Oct 7, 2005.
Modified: Apr 3, 2006.
Primary publication:

Rhodococcus sp. RHA1

Sequenced by: University of British Columbia

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008268
Total Bases: 7804765 bp
Number of genes: 7279
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008269
Total Bases: 1123075 bp
Number of genes: 1150
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008270
Total Bases: 442536 bp
Number of genes: 458
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008271
Total Bases: 332361 bp
Number of genes: 334
Released: Jul 28, 2006.
Modified: Aug 22, 2006.
Primary publication: Characterization of biphenyl catabolic genes of gram-positive polychlorinated biphenyl degrader Rhodococcus sp. strain RHA1.

Rhodoferax ferrireducens T118

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007908
Total Bases: 4712337 bp
Number of genes: <4304/li>
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007901
Total Bases: 257447 bp
Number of genes: 251
Released: Mar 10, 2006.
Modified: May 18, 2006.
Primary publication: Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III).

Rhodopirellula baltica SH 1

Sequenced by: Max-Plank-Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005027
Total Bases: 7145576 bp
Number of genes: 7404
Released: Jul 2, 2003.
Modified: Jan 18, 2006.
Primary publication: Complete genome sequence of the marine planctomycete Pirellula sp. strain 1.

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008435
Total Bases: 5505494 bp
Number of genes: 4972
Released: Oct 4, 2006.
Modified: Oct 5, 2006.
Primary publication:

Rhodopseudomonas palustris BisB18

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007925
Total Bases: 5513844 bp
Number of genes: 5016
Released: Mar 21, 2006.
Modified: Mar 30, 2006.
Primary publication:

Rhodopseudomonas palustris BisB5

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007958
Total Bases: 4892717 bp
Number of genes: 4492
Released: Apr 10, 2006.
Modified: Apr 14, 2006.
Primary publication:

Rhodopseudomonas palustris CGA009

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005296
Total Bases: 5459213 bp
Number of genes: 4891
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005297
Total Bases: 8427 bp
Number of genes: 7
Released: Jan 6, 2004.
Modified: May 30, 2006.
Primary publication: Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris.

Rhodopseudomonas palustris HaA2

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007778
Total Bases: 5331656 bp
Number of genes: 4772
Released: Feb 6, 2006.
Modified: Mar 30, 2006.
Primary publication:

Rhodospirillum rubrum ATCC 11170

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007643
Total Bases: 4352825 bp
Number of genes: 3870
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007641
Total Bases: 53732 bp
Number of genes: 50
Released: Dec 12, 2005.
Modified: Apr 3, 2006.
Primary publication:

Rickettsia bellii RML369-C

Sequenced by: CNRS

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007940
Total Bases: 1522076 bp
Number of genes: 1469
Released: Apr 5, 2006.
Modified: May 30, 2006.
Primary publication: Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens.

Rickettsia conorii str. Malish 7

Sequenced by: CNRS

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003103
Total Bases: 1268755 bp
Number of genes: 1414
Released: Oct 13, 2000.
Modified: Apr 3, 2006.
Primary publication-1: Selfish DNA in protein-coding genes of Rickettsia.
Primary publication-2: Mechanisms of evolution in Rickettsia conorii and R. prowazekii.

Rickettsia felis URRWXCal2

Sequenced by: CNRS

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007109
Total Bases: 1485148 bp
Number of genes: 1439
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007110
Total Bases: 62829 bp
Number of genes: 68
Purine/Keto/Coding Asymmetry Plot
Accession: NC_007111
Total Bases: 39263 bp
Number of genes: 44
Released: Jun 7, 2005.
Modified: Apr 3, 2006.
Primary publication: The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite.

Rickettsia prowazekii str. Madrid E

Sequenced by: Uppsala University

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000963
Total Bases: 1111523 bp
Number of genes: 886
Released: Nov 21, 1998.
Modified: Jan 18, 2006.
Primary publication: The genome sequence of Rickettsia prowazekii and the origin of mitochondria.

Rickettsia typhi str. Wilmington

Sequenced by: Human Genome Sequencing Center, Baylor College of Medicine

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_006142
Total Bases: 1111496 bp
Number of genes: 919
Released: Aug 20, 2004.
Modified: Apr 3, 2006.
Primary publication: Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae.

Roseobacter denitrificans OCh 114

Sequenced by: Arizona State University/TGen

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008209
Total Bases: 4133097 bp
Number of genes: 4007
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008386
Total Bases: 106469 bp
Number of genes: 106
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008387
Total Bases: 69269 bp
Number of genes: 56
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008388
Total Bases: 16575 bp
Number of genes: 16
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008389
Total Bases: 5824 bp
Number of genes: 6
Released: Jun 22, 2006.
Modified: Jul 25, 2006.
Primary publication-1: solation of Aerobic Anoxygenic Photosynthetic Bacteria from Black Smoker Plume Waters of the Juan de Fuca Ridge in the Pacific Ocean.
Primary publication-2: Photosynthetic rhizobia
Primary publication-3: Contribution of aerobic photoheterotrophic bacteria to the carbon cycle in the ocean.
Primary publication-4: Isolation of tellurite- and selenite-resistant bacteria from hydrothermal vents of the Juan de Fuca Ridge in the Pacific Ocean.

Rubrobacter xylanophilus DSM 9941

Sequenced by: DOE Joint Genome Institute

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_008148
Total Bases: 3225748 bp
Number of genes: 3281
Released: Jun 9, 2006.
Modified: Jun 12, 2006.
Primary publication:

Sequenced by:

Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_00
Total Bases: bp
Number of genes:
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Thermoplasma acidophilum

Sequenced by: Max-Planck-Institute for Biochemistry
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002578
Total Bases: 1564906 bp
Completed: Oct 12, 2001.
Last updated: [+ $dates{"tacidophilum"} +]
Number of genes: 1482
Primary publication: The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum

Thermosynechococcus elongatus BP-1

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004113
Total Bases: 2593857 bp
Completed: Aug 19, 2002.
Last updated: [+ $dates{"telongatus"} +]
Number of genes: 2475
Primary publication: Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1.

Thermotoga maritima

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000853
Total Bases: 1860725 bp
Completed: Sep 10, 2001.
Last updated: [+ $dates{"tmaritima"} +].
Number of genes: 1858
Primary publication: Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima.

Treponema pallidum

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000919
Total Bases: 1138011 bp
Completed: Sep 7, 2001.
Last updated: [+ $dates{"tpallidum"} +].
Number of genes: 1036
Primary publication: Complete genome sequence of Treponema pallidum, the syphilis spirochete

Thermoanaerobacter tengcongensis

Sequenced by: Beijing Center HGP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003869
Total Bases: 2689445 bp
Completed: Oct 7, 2001.
Last updated: [+ $dates{"ttengcongensis"} +]
Number of genes: 2588
Primary publication: Thermoanaerobacter tengcongensis sp. nov., a novel anaerobic, saccharolytic, thermophilic...

Thermoplasma volcanium GSS1

Sequenced by: NIBHT-JP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002689
Total Bases: 1584804 bp
Completed: Mar 22, 2001.
Last updated: [+ $dates{"tvolcanium"} +]
Number of genes: 1499
Primary publication: Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium.

Tropheryma whipplei TW08/27

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004551
Total Bases: 925938 bp
Completed: Feb 27, 2003.
Last updated: [+ $dates{"twhipplei-TW08-27"} +]
Number of genes: 783
Primary publication: Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei.

Tropheryma whipplei str. Twist

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004572
Total Bases: 927303 bp
Completed: Feb 24, 2003.
Last updated: [+ $dates{"twhipplei-Twist"} +]
Number of genes: 808
Primary publication: Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a reduced genome.

Ureaplasma urealyticum

Sequenced by: University of Alabama
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002162
Total Bases: 751719 bp
Completed: Jan 10, 2000
Last updated: [+ $dates{"uurealyticum"} +].
Number of genes: 614
Primary publication: The complete sequence of the mucosal pathogen Ureaplasma urealyticum

Vibrio cholerae

Sequenced by: TIGR
Local FTP
Last updated: [+ $dates{"vcholerae"} +]
Primary publication: DNA Sequence of both chromosomes of the cholera pathogen Vibrio cholerae

Vibrio cholerae chromosome I

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002505
Total Bases: 2961149 bp
Completed: Sep 10, 2001.
Last updated: [+ $dates{"vcholerae"} +]
Number of genes: 2742

Vibrio cholerae chromosome II

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002506
Total Bases: 1072315 bp
Completed: Sep 10, 2001.
Last updated: [+ $dates{"vcholerae"} +]
Number of genes: 1093

Vibrio parahaemolyticus RIMD 2210633

Sequenced by: Osaka Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004603
Total Bases: 3288558 bp
Completed: Mar 10, 2003.
Last updated: [+ $dates{"vparahaemolyticus"} +]
Number of genes: 3080
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004605
Total Bases: 1877212 bp
Completed: Mar 10, 2003.
Last updated: [+ $dates{"vparahaemolyticus"} +]
Number of genes: 1752
Primary publication: Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae.

Vibrio vulnificus CMCP6

Sequenced by: Chonnam Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004459
Total Bases: 3281945 bp
Completed: Dec 23, 2002.
Last updated: [+ $dates{"vvulnificus-CMCP6"} +]
Number of genes: 2952
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004460
Total Bases: 1844853 bp
Completed: Dec 23, 2002.
Last updated: [+ $dates{"vvulnificus-CMCP6"} +]
Number of genes: 1562

Vibrio vulnificus YJ016

Sequenced by: NHRI, Taiwan
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005128
Total Bases: 48508 bp
Completed: Oct 9, 2003.
Last updated: [+ $dates{"vvulnificus-YJ016"} +]
Number of genes: 69
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005139
Total Bases: 3354505 bp
Completed: Oct 15, 2003.
Last updated: [+ $dates{"vvulnificus-YJ016"} +]
Number of genes: 3259
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005140
Total Bases: 1857073 bp
Completed: Oct 15, 2003.
Last updated: [+ $dates{"vvulnificus-YJ016"} +]
Number of genes: 1696
Primary publication: Comparative Genome Analysis of Vibrio vulnificus, a Marine Pathogen

Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

Sequenced by: Yale Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004344
Total Bases: 697724 bp
Completed: Oct 24, 2002.
Last updated: [+ $dates{"wbrevipalpis"} +]
Number of genes: 611
Primary publication: Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia.

Wolinella succinogenes DSM 1740

Sequenced by: Max-Plank-Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005090
Total Bases: 2110355 bp
Completed: Sep 10, 2003.
Last updated: [+ $dates{"wsuccinogenes"} +]
Number of genes: 2044
Primary publication: Complete genome sequence and analysis of Wolinella succinogenes

Xanthomonas campestris pv. campestris str. ATCC 33913

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003902
Total Bases: 5076188 bp
Completed: Nov 28, 2001.
Last updated: [+ $dates{"xcampestris"} +]
Number of genes: 4181
Primary publication: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

Xanthomonas axonopodis pv. citri str. 306

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003919
Total Bases: 5175554 bp
Completed: Nov 28, 2001.
Last updated: [+ $dates{"xcitri"} +]
Number of genes: 4312
Primary publication: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.

Xylella fastidiosa

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002488
Total Bases: 2679306 bp
Completed: Oct 2, 2001
Last updated: [+ $dates{"xfastidiosa"} +].
Number of genes: 2766
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002489
Total Bases: 1286 bp
Completed: Jun 2, 2000
Last updated: [+ $dates{"xfastidiosa"} +].
Number of genes: 2
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002490
Total Bases: 51158 bp
Completed: Jun 2, 2000
Last updated: [+ $dates{"xfastidiosa"} +].
Number of genes: 64
Primary publication: The genome sequence of the plant pathogen Xylella fastidiosa

Xylella fastidiosa Temecula1

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004554
Total Bases: 1346 bp
Completed: Feb 1, 2003.
Last updated: [+ $dates{"xfastidiosa-Temecula1"} +]
Number of genes: 2
Accession: NC_004556
Total Bases: 2519802 bp
Completed: Feb 3, 2003.
Last updated: [+ $dates{"xfastidiosa-Temecula1"} +]
Number of genes: 2034
Primary publication:

Yersinia pestis CO92

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003131
Total Bases: 70305 bp
Completed: Sep 3, 1999.
Last updated: [+ $dates{"ypestis-CO92"} +]
Number of genes: 72
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003132
Total Bases: 9612 bp
Completed: Aug 19, 1999.
Last updated: [+ $dates{"ypestis-CO92"} +]
Number of genes: 9
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003134
Total Bases: 96210 bp
Completed: Sep 6, 1999.
Last updated: [+ $dates{"ypestis-CO92"} +]
Number of genes: 101
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003143
Total Bases: 4653728 bp
Completed: Oct 15, 2001.
Last updated: [+ $dates{"ypestis-CO92"} +]
Number of genes: 3885
Primary publication: Genome sequence of Yersinia pestis, the causative agent of plague.

Yersinia pestis KIM

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004088
Total Bases: 4600755 bp
Completed: Jul 29, 2002.
Last updated: [+ $dates{"ypestis-KIM"} +]
Number of genes: 4086
Primary publication: Genome Sequence of Yersinia pestis KIM