Completed Genomes collected resources

Gene annotation keyword search

Cross genome similarities

Gene family diagnostic Profiles
A B C D E F H I J K L M N O P Q R S T U V W X Y Z

Aquifex aeolicus

Sequenced by: DIVERSA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000918
Total Bases: 1551335 bp
Completed: Aug 23, 2001.
Last updated:
Number of genes: 1561
Primary publication: The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

Archaeoglobus fulgidus

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000917
Total Bases: 2178400 bp
Completed: Dec 17, 1997.
Last updated:
Number of genes: 2435
Primary publication: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus

Aeropyrum pernix

Sequenced by: NCBI
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000854
Total Bases: 1669695 bp
Completed: Jul 5,, 2001.
Last updated:
Number of genes: 1842
Primary publication: Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.

Agrobacterium tumefaciens str. C58 Cereon

Sequenced by: CEREON
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003062
Total Bases: 2841581 bp
Completed: Oct 3, 2001.
Number of genes: 2721
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003063
Total Bases: 2074782 bp
Completed: Oct 3, 2001.
Number of genes: 1833
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003064
Total Bases: 542869 bp
Completed: Aug 14, 2001.
Number of genes: 547
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003065
Total Bases: 214331 bp
Completed: Aug 14, 2001.
Number of genes: 192
Last updated:
Primary publication: The genome of the natural genetic engineer Agrobacterium tumefaciens C58.

Agrobacterium tumefaciens str. C58 U. Washington

Sequenced by: UWASHINGTON
Local FTP
General Features: General Features
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003304
Total Bases: 2841490 bp
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003305
Total Bases: 2075560 bp
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003306
Total Bases: 542780 bp
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003308
Total Bases: 214234 bp
Completed: Sep 27, 2001.
Last updated:
Number of genes: 5402
Primary publication: The genome of the natural genetic engineer Agrobacterium tumefaciens C58.

Bacillus anthracis str. A2012

Sequenced by: Bacillus anthracis strain A2012
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003995
Total Bases: 5093554 bp
Completed: May 9, 2002.
Last updated: .
Number of genes: 5852
Primary publication: Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis.

Bacillus anthracis Ames

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003997
Total Bases: 5227293 bp
Completed: May 16, 2002.
Last updated: .
Number of genes: 5311
Primary publication: The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria

Buchnera aphidicola str. Bp (Baizongia pistaciae)

Sequenced by: Valencia univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004545
Total Bases: 615980 bp
Completed: Jan 27, 2003.
Last updated:
Number of genes: 504
Primary publication: Reductive genome evolution in Buchnera aphidicola

Buchnera aphidicola str. APS (Acyrthosiphon pisum)

Sequenced by: Rokken GSC
Local FTP
Accession: NC_002252
Total Bases: 7258 bp
Completed: May 3, 2000.
Number of genes: 3
Accession: NC_002253
Total Bases: 7786 bp
Completed: May 3, 2000.
Number of genes: 7
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002528
Total Bases: 640681 bp
Completed: Sep 10, 2001.
Number of genes: 564
Last updated:
Primary publication: Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS.

Buchnera aphidicola str. Sg (Schizaphis graminum)

Sequenced by: Uppsala Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004061
Total Bases: 641454 bp
Completed: JUN 10, 2002.
Last updated:
Number of genes: 546
Primary publication: 50 Million Years of Genomic Stasis in Endosymbiotic Bacteria

Bordetella bronchiseptica RB50

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002927
Total Bases: 5339179 bp
Completed: Nov 6, 2001.
Last updated:
Number of genes: 4994
Primary publication: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Borrelia burgdorferi B31

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_001318
Total Bases: 910724 bp
Completed: Sep 7, 2001.
Last updated: .
Number of genes: 903
Primary publication: Genomic sequence of a Lyme disease spirochaete, Borrelia

Bacillus cereus ATCC 14579

Sequenced by: INRA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004721
Total Bases: 15100 bp
Completed: May 16, 2003.
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004722
Total Bases: 5411809 bp
Completed: Apr 17, 2003.
Last updated: .
Number of genes: 5255
Primary publication: Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis.

Bifidobacterium longum NCC2705

Sequenced by: Nestle Research Center, Switzerland
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004307
Total Bases: 2256646 bp
Completed: Sep 27, 2002.
Last updated: .
Number of genes: 1727
Primary publication: The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Brucella melitensis

Sequenced by: Integrated Genomics
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003317
Total Bases: 2117144 bp
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003318
Total Bases: 1177787 bp
Completed: Nov 13, 2001.
Last updated: .
Number of genes: 3198
Primary publication: The genome sequence of the facultative intracellular pathogen Brucella melitensis

Bordetella parapertussis 12822

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002928
Total Bases: 4773551 bp
Completed: Nov 6, 2001.
Last updated: .
Number of genes: 4187
Primary publication: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Bordetella pertussis Tohama I

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002929
Total Bases: 4086189 bp
Completed: Nov 6, 2001.
Last updated: .
Number of genes: 3436
Primary publication: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Bacillus subtilis

Sequenced by: BSNR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000964
Total Bases: 4214814 bp
Completed: Nov 20, 1997.
Last updated: .
Number of genes: 4112
Primary publication: The complete genome sequence of the gram-positive bacterium Bacillus subtilis.

Brucella suis 1330

Sequenced by: NITE-TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004310
Total Bases: 2107792 bp
Completed: Sep 30, 2002.
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004311
Total Bases: 1207381 bp
Completed: Oct 2, 2002.
Last updated: .
Number of genes: 3264
Primary publication: The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.

Bacteroides thetaiotaomicron VPI-5482

Sequenced by: Wash.U-GSC
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004663
Total Bases: 6260361 bp
Completed: Mar 28, 2003.
Last updated: .
Number of genes: 4778
Primary publication: A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.

Buchnera sp. APS

Sequenced by:
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002528
Total Bases: 640681 bp
Completed: Sep 12, 2000.
Last updated: .
Number of genes: 564
Primary publication: Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

Clostridium acetobutylicum

Sequenced by: Genome Therapeutics
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003030
Total Bases: 3940880 bp
Completed: Oct 3, 2001.
Last updated:
Number of genes: 3848
Primary publication: Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum.

Candidatus Blochmannia floridanus

Sequenced by: Univ. Valencia
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005061
Total Bases: 705557 bp
Completed: Aug 8, 2003.
Last updated:
Number of genes: 583
Primary publication: The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes.

Coxiella burnetii

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002971
Total Bases: 1995275 bp
Completed: Aug 28, 2001.
Last updated:
Number of genes: 2009
Primary publication: Complete genome sequence of the Q-fever pathogen Coxiella burnetii.

Chlamydophila caviae

Sequenced by: TUGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003361
Total Bases: 1173390 bp
Completed: Feb 14, 2002.
Last updated:
Number of genes: 1005
Primary publication: Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC):examining the role of niche-specific genes in the evolution of the Chlamydiaceae.

Caulobacter crescentus

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002696
Total Bases: 4016947 bp
Completed: Mar 21, 2001.
Last updated:
Number of genes: 3737
Primary publication: Complete genome sequence of Caulobacter crescentus.

Corynebacterium diphtheriae

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002935
Total Bases: 2488635 bp
Completed: Nov 6, 2001.
Last updated:
Number of genes: 2272
Primary publication: The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.

Corynebacterium efficiens YS-314

Sequenced by: NITE
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004369
Total Bases: 3147090 bp
Completed: Nov 15, 2002.
Last updated:
Number of genes: 2950
Primary publication: Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.

Caenorhabditis elegans

Sequenced by: Sanger Centre
Sequenced by: WASHU
Local FTP
Completed: Aug 11, 1997.
Last updated:

Caenorhabditis elegans Chromosome I

Purine/Keto/Coding Asymmetry Plot
Accession: NC_003279
Total Bases Sequenced: 12251269 bp
Number of genes: 14908

Caenorhabditis elegans Chromosome II

Purine/Keto/Coding Asymmetry Plot
Accession: NC_003280
Total Bases Sequenced: 16023617 bp
Number of genes: 17031

Caenorhabditis elegans Chromosome III

Purine/Keto/Coding Asymmetry Plot
Accession: NC_003281
Total Bases Sequenced: 11335821 bp
Number of genes: 5728

Caenorhabditis elegans Chromosome IV

Purine/Keto/Coding Asymmetry Plot
Accession: NC_003282
Total Bases Sequenced: 10710650 bp
Number of genes: 14350

Caenorhabditis elegans Chromosome V

Purine/Keto/Coding Asymmetry Plot
Accession: NC_003283
Total Bases Sequenced: 20409546 bp
Number of genes: 23128

Caenorhabditis elegans Chromosome X

Purine/Keto/Coding Asymmetry Plot
Accession: NC_003284
Total Bases Sequenced: 15903956 bp
Number of genes: 17062

cglutamicum

Corynebacterium glutamicum

Sequenced by: Kitasato University
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003450
Total Bases: 3309401 bp
Completed: Mar 12, 2001.
Last updated:
Number of genes: 2993
Primary publication: Expression and functional analysis of a gene cluster involved in the synthesis of decaprenoxanthin reveals the mechanisms for C50 carotenoid formation

Chlamydia muridarum

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002620
Total Bases: 1072950 bp
Completed: Oct 2, 2001.
Last updated:
Number of genes: 911
Primary publication: Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.

Chlamydia pneumoniae AR39

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002179
Total Bases: 1229858 bp
Completed: Nov 6, 2001.
Last updated:
Number of genes: 1112
Primary publication: Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.

Chlamydia pneumoniae AR39 phage phiCPAR39

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002180
Total Bases: 4532 bp
Completed: Feb 29, 2000.
Number of genes: 6

Chlamydia pneumoniae CWL029

Sequenced by: ChGP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000922
Total Bases: 1230230 bp
Completed: Sep 10, 2001.
Last updated: .
Number of genes: 1054
Primary publication: Comparative genomes of Chlamydia pneumoniae and C. trachomatis.

Chlamydia pneumoniae J138

Sequenced by: Yamaguchi-Kyushu Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002491
Total Bases: 1226565 bp
Completed: Oct 2, 2001.
Last updated:
Number of genes: 1069
Primary publication: Comparison of whole genome sequences of chlamydia pneumoniae J138 from japan and CWL029 from USA

Chlamydophila pneumoniae TW-183

Sequenced by: ALTANA Pharma
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005043
Total Bases: 1225935 bp
Completed: Jul 25, 2003.
Last updated:
Number of genes: 1113

Chlorobium tepidum TLS

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002932
Total Bases: 2154946 bp
Completed: Apr 30, 2002.
Last updated:
Number of genes: 2252
Primary publication: The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.

Clostridium tetani E88

Sequenced by: Gottingen Genomics Laboratory
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004557
Total Bases: 2799251 bp
Completed: Feb 5, 2003.
Last updated:
Number of genes: 2373
Primary publication: The genome sequence of Clostridium tetani, the causative agent of tetanus disease.

Chlamydia trachomatis

Sequenced by: ChGP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000117
Total Bases: 1042519 bp
Completed: Sep 10, 2001.
Last updated: .
Number of genes: 895
Primary publication: Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

Chromobacterium violaceum ATCC 12472

Sequenced by:
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005085
Total Bases: 4751080 bp
Completed: Sep 8, 2003.
Last updated:
Number of genes: 4407
Primary publication: The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability.

Drosophila melanogaster

Sequenced by: Celera and the BDGP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Purine/Keto/Coding Asymmetry Plot
Number of genes: 18107
Last updated:
Primary publication: Science March 24, 2000

Deinococcus radiodurans R1

Sequenced by: TIGR
Local FTP
Last updated:
Primary publication: Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.

Deinococcus radiodurans Chromosome I

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001263
Total Bases: 2648638 bp
Completed: Sep 28, 2001.
Number of genes: 2629

Deinococcus radiodurans Chromosome II

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001264
Total Bases: 412348 bp
Completed: Sep 28, 2001.
Number of genes: 368

Deinococcus radiodurans Plasmid MP1

Purine/Keto/Coding Asymmetry Plot
Accession: NC_000958
Total Bases: 177466 bp
Completed: Sep 28, 2001.
Number of genes: 146

Deinococcus radiodurans Plasmid CP1

Purine/Keto/Coding Asymmetry Plot
Accession: NC_000959
Total Bases: 45704 bp
Completed: Sep 28, 2001.
Number of genes: 39

Escherichia coli CFT073

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004431
Total Bases: 5231428 bp
Completed: Dec 9, 2002.
Last updated: .
Number of genes: 5379
Primary publication: Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.

Escherichia coli K-12

Sequenced by: U Wisc
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000913
Total Bases: 4639675 bp
Completed: Oct 15, 2001.
Last updated: .
Number of genes: 4311
Primary publication: The complete genome sequence of Escherichia coli K-12

Escherichia coli O157:H7 EDL933

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002655
Total Bases: 5528445 bp
Completed: Sep 27, 2001.
Last updated: .
Number of genes: 5324
Primary publication: Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.

Enterococcus faecalis V583

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004668
Total Bases: 3218031 bp
Completed: Mar 31, 2003.
Last updated:
Number of genes: 3113
Primary publication: Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis.

Fusobacterium nucleatum ATCC 25586

Sequenced by: Integrated Genomics
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003454
Total Bases: 2174500 bp
Completed: Feb 13, 2002.
Last updated:
Number of genes: 2067
Primary publication: Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586.

Gloeobacter violaceus PCC 7421

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005125
Total Bases: 4659019 bp
Completed: Oct 6, 2003.
Last updated:
Number of genes: 4430
Primary publication: Complete Genome Structure of Gloeobacter violaceus PCC 7421, a Cyanobacterium that Lacks Thylakoids

Halobacterium sp. NRC-1

Sequenced by: Univ. of Mass-Amherst
Local FTP
Last updated:
Primary publication: Genome sequence of Halobacterium species NRC-1

Halobacterium Chromosome

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002607
Total Bases: 2014239 bp
Completed: Sep 27, 2001.
Number of genes: 2075

Halobacterium plasmid pNRC200

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002608
Total Bases: 365425 bp
Completed: Sep 27, 2001.
Number of genes: 371

Halobacterium plasmid pNRC100

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001869
Total Bases: 191346 bp
Completed: Sep 27, 2001.
Number of genes: 176

Haemophilus ducreyi 35000HP

Sequenced by:
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002940
Total Bases: 1698955 bp
Completed: Oct 24, 2001.
Last updated:
Number of genes: 1717

Haemophilus influenzae Rd

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000907
Total Bases: 1830138 bp
Completed: Oct 19, 2001.
Last updated: .
Number of genes: 1657
Primary publication: Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

Helicobacter pylori 26695

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000915
Total Bases: 1667867 bp
Completed: Sep 7, 2001.
Last updated: .
Number of genes: 1576
Primary publication: The complete genome sequence of the gastric pathogen Helicobacter pylori

Helicobacter pylori J99

Sequenced by: ASTRA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000921
Total Bases: 1643831 bp
Completed: Sep 10, 2001.
Last updated:
Number of genes: 1491
Primary publication: Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori

Listeria innocua

Sequenced by: Institut Pasteur
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003212
Total Bases: 3011208 bp
Completed: Nov 8, 2001.
Last updated:
Number of genes: 3043
Primary publication: Comparative Genomics of Listeria Species

Leptospira interrogans serovar Lai str. 56601

Sequenced by: Chinese National HGC Shanghai
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004342
Total Bases: 4332241 bp
Number of genes: 4360
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004343
Total Bases: 358943 bp
Number of genes: 367
Completed: Oct 21, 2002.
Last updated:
Primary publication: Unique physiological and pathogenic features of Leptospira interrogans revealed by whole-genome sequencing.

Lactococcus lactis

Sequenced by: INRA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002662
Total Bases: 2365589 bp
Completed: Sep 19, 2001.
Last updated:
Number of genes: 2321
Primary publication: Low-redundancy sequencing of the entire Lactococcus lactis IL1403 genome.

Listeria monocytogenes

Sequenced by: European Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003210
Total Bases: 2944528 bp
Completed: Nov 8, 2001.
Last updated:
Number of genes: 2846
Primary publication: Comparative Genomics of Listeria Species

Lactobacillus plantarum

Sequenced by: Wageningen Center for Food Sciences
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004567
Total Bases: 3308274 bp
Completed: Feb 14, 2003.
Last updated:
Number of genes: 3009
Primary publication: Complete genome sequence of Lactobacillus plantarum WCFS1.

Methanosarcina acetivorans

Sequenced by: Whitehead Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003552
Total Bases: 5751492 bp
Completed: Mar 20, 2002.
Last updated:
Number of genes: 4540
Primary publication: The Genome of M. acetivorans Reveals Extensive Metabolic and Physiological Diversity

Mycobacterium avium

Sequenced by: Univ. Minnesota
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002944
Total Bases: 4829781 bp
Completed: Dec 27, 2001.
Last updated:
Number of genes: 4350

Mycobacterium bovis

Sequenced by: Sanger Institut
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002945
Total Bases: 4345492 bp
Completed: Jan 25, 2001.
Last updated:
Number of genes: 3920
Primary publication: The complete genome sequence of Mycobacterium bovis.

Mycoplasma gallisepticum

Sequenced by: Univ. Connecticut
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004829
Total Bases: 996422 bp
Completed: Jun 9, 2003.
Last updated:
Number of genes: 726
Primary publication: The complete genome sequence of the avian pathogen Mycoplasma gallisepticum strain R(low).

Mycoplasma genitalium G-37

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000908
Total Bases: 580074 bp
Completed: Jan 8, 2001.
Last updated: .
Number of genes: 484
Primary publication: The minimal gene complement of Mycoplasma genitalium.

Methanococcus jannaschii

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000909
Total Bases: 1664970 bp
Completed: Jan 30, 1998.
Last updated: .
Number of genes: 1729
Primary publication: Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii

Methanopyrus kandleri

Sequenced by: Fidelity Systems
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003551
Total Bases: 1694969 bp
Completed: Feb 4, 2002.
Last updated:
Number of genes: 1687
Primary publication: The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens

Mycobacterium leprae

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002677
Total Bases: 3268203 bp
Completed: Oct 2, 2001.
Last updated:
Number of genes: 1605
Primary publication: Massive gene decay in the leprosy bacillus.

Mesorhizobium loti

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002678
Total Bases: 7036074 bp
Completed: Feb 3, 2001.
Number of genes: 6746
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002679
Total Bases: 351911 bp
Completed: Feb 3, 2001.
Number of genes: 320
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002682
Total Bases: 208315 bp
Completed: Mar 29, 2001.
Number of genes: 209
Last updated:
Primary publication: Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.

Methanosarcina mazei

Sequenced by:
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003901
Total Bases: 4096345 bp
Completed: Aug 23, 2001.
Last updated:
Number of genes: 3371
Primary publication: The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea.

Mycoplasma penetrans

Sequenced by: NIID Japan
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004432
Total Bases: 1358633 bp
Completed: Dec 12, 2002.
Last updated:
Number of genes: 1037
Primary publication: The complete genomic sequence of Mycoplasma penetrans, an intracellular bacterial pathogen in humans.

Mycoplasma pneumoniae M129

Sequenced by: Heidelberg Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000912
Total Bases: 816394 bp
Completed: Apr 2, 2001.
Last updated: .
Number of genes: 689
Primary publication: Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae

Mycoplasma pulmonis

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002771
Total Bases: 963879 bp
Completed: Oct 2, 2001.
Last updated:
Number of genes: 782
Primary publication: The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis

Methanobacterium thermoautotrophicus

Sequenced by: Genome Therapeutics
Sequenced by: Ohio State Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000916
Total Bases: 1751377 bp
Completed: Sep 19, 2001.
Last updated: .
Number of genes: 1873
Primary publication: Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics

Mycobacterium tuberculosis CDC1551

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002755
Total Bases: 4403836 bp
Completed: Oct 2, 2001.
Last updated:
Number of genes: 4187
Primary publication: Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.

Mycobacterium tuberculosis H37Rv

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000962
Total Bases: 4411529 bp
Completed: Sep 7, 2001.
Last updated: .
Number of genes: 3927
Primary publication: Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequenc

Nanoarchaeum equitans

Sequenced by: DIVERSA
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005213
Total Bases: 490885 bp
Completed: Nov 17, 2003.
Last updated:
Number of genes: 536
Primary publication: The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism.

Nitrosomonas europaea

Sequenced by: DoeJoint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004757
Total Bases: 2812094 bp
Completed: Apr 30, 2003.
Last updated:
Number of genes: 2461
Primary publication: Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea.

Neisseria meningitidis MC58

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003112
Total Bases: 2272351 bp
Completed: Sep 19, 2001.
Last updated:
Number of genes: 2079
Primary publication: Complete genome sequence of Neisseria meningitidis serogroup B strain MC58

Oceanobacillus iheyensis

Sequenced by: Japan MSTC
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004193
Total Bases: 3630528 bp
Completed: Sep 18, 2002.
Last updated:
Number of genes: 3500
Primary publication: Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments.

Pyrococcus abyssi

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000868
Total Bases: 1765118 bp
Completed: Jun 21, 2001.
Last updated: .
Number of genes: 1896
Primary publication: An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.

Pyrobaculum aerophilum

Sequenced by: UCAL/CalTech
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003364
Total Bases: 2222430 bp
Completed: Dec 12, 2001.
Last updated:
Number of genes: 2605
Primary publication: Genome sequence of the hyperthermophilic crenarchaeon Pyrobaculum aerophilum.

Pseudomonas aeruginosa PA01

Sequenced by: PathoGenesis Corporation
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002516
Total Bases: 6264403 bp
Completed: Sep 10, 2001.
Last updated:
Number of genes: 5567
Primary publication: Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen

Pyrococcus furiosus DSM 3638

Sequenced by: Utah Genome Center
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003413
Total Bases: 1908256 bp
Completed: Feb 12, 2002.
Last updated:
Number of genes: 2125
Primary publication: Genomic sequence of hyperthermophile, Pyrococcus furiosus: mplications for physiology and enzymology.

Porphyromonas gingivalis W83

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002950
Total Bases: 2343476 bp
Completed: Dec 7, 2001.
Last updated:
Number of genes: 1909
Primary publication: Complete Genome Sequence of the Oral Pathogenic Bacterium Porphyromonas gingivalis Strain W83

Pyrococcus horikoshii OT3

Sequenced by: NITE
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000961
Total Bases: 1738505 bp
Completed: Jul 3, 2001.
Last updated:
Number of genes: 1956
Primary publication: Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3.

Pirellula_sp

Sequenced by: Max-Plank-Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005027
Total Bases: 7145576 bp
Completed: Jul 8, 2003.
Last updated:
Number of genes: 7325
Primary publication: Complete genome sequence of the marine planctomycete Pirellula sp. strain 1.

Photorhabdus luminescens

Sequenced by: Institut Pasteur
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005126
Total Bases: 5688987 bp
Completed: Oct 6, 2003.
Last updated:
Number of genes: 4683
Primary publication: The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens

Prochlorococcus marinus subsp. marinus str. CCMP1375

Sequenced by: CNRS
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005042
Total Bases: 1751080 bp
Completed: Jul 25, 2003.
Last updated:
Number of genes: 1882
Primary publication: Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

Prochlorococcus marinus str. MIT 9313

Sequenced by: DOEJoint Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005071
Total Bases: 2410873 bp
Completed: Aug 19, 2003.
Last updated:
Number of genes: 2265
Primary publication: Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

Pasteurella multocida

Sequenced by: Univ. Minnesota
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002663
Total Bases: 2257487 bp
Completed: Sep 10, 2001.
Last updated:
Number of genes: 2015
Primary publication: Complete genomic sequence of Pasteurella multocida, Pm70.

Pseudomonas putida KT2440

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002947
Total Bases: 6181863 bp
Completed: Feb 14, 2002.
Last updated:
Number of genes: 5350
Primary publication: Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Pseudomonas syringae

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004578
Total Bases: 6397126 bp
Completed: Mar 6, 2003.
Last updated:
Number of genes: 5471
Primary publication: The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.

Rickettsia conorii

Sequenced by: CNRS
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003103
Total Bases: 1268755 bp
Completed: Oct 3, 2001.
Last updated:
Number of genes: 1374
Primary publication: Mechanisms of evolution in Rickettsia conorii and R. prowazekii.

Rhodopseudomonas palustris CGA009

Sequenced by: DOEJoin Genome Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005296
Total Bases: 5459213 bp
Completed: Dec 16, 2003.
Last updated:
Number of genes: 4814
Primary publication: Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris.

Rickettsia prowazekii strain Madrid E

Sequenced by: University of Uppsala
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000963
Total Bases: 1111523 bp
Completed: Sep 10, 2001.
Last updated: .
Number of genes: 835
Primary publication: The genome sequence of Rickettsia prowazekii and the origin of mitochondria.

Streptococcus agalactiae 2603V/R

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004116
Total Bases: 2160267 bp
Completed: Aug 28, 2002.
Last updated:
Number of genes: 2124
Primary publication: Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae.

Streptococcus agalactiae NEM316

Sequenced by: Institute Pasteur
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004368
Total Bases: 2211485 bp
Completed: Nov 15, 2002.
Last updated:
Number of genes: 2094
Primary publication: Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal disease.

Saccharomyces cerevisiae

Sequenced by: SGD
Local FTP
Last updated: .

Saccharomyces cerevisiae mitochondrion

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001224
Total Bases: 85779 bp
Completed: Aug 29, 1999
Number of genes: 19

Saccharomyces cerevisiae chromosome I

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001133
Total Bases: 230208 bp
Completed: Nov 8, 1999.
Number of genes: 97

Saccharomyces cerevisiae chromosome II

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001134
Total Bases: 813178 bp
Completed: Nov 9, 1999
Number of genes: 406

Saccharomyces cerevisiae chromosome III

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001135
Total Bases: 316616 bp
Completed: Nov 9, 1999.
Number of genes: 157

Saccharomyces cerevisiae chromosome IV

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001136
Total Bases: 1531916 bp
Completed: Nov 9, 1999.
Number of genes: 748

Saccharomyces cerevisiae chromosome V

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001137
Total Bases: 576869 bp
Completed: Nov 9, 1999.
Number of genes: 273

Saccharomyces cerevisiae chromosome VI

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001138
Total Bases: 270148 bp
Completed: Nov 9, 1999.
Number of genes: 126

Saccharomyces cerevisiae chromosome VII

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001139
Total Bases: 1090946 bp
Completed: Nov 9, 1999.
Number of genes: 524

Saccharomyces cerevisiae chromosome VIII

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001140
Total Bases: 562641 bp
Completed: Nov 9, 1999.
Number of genes: 281

Saccharomyces cerevisiae chromosome IX

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001141
Total Bases: 439885 bp
Completed: Nov 9, 1999.
Number of genes: 205

Saccharomyces cerevisiae chromosome X

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001142
Total Bases: 745666 bp
Completed: Nov 9, 1999.
Number of genes: 356

Saccharomyces cerevisiae chromosome XI

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001143
Total Bases: 666454 bp
Completed: Nov 9, 1999.
Number of genes: 310

Saccharomyces cerevisiae chromosome XII

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001144
Total Bases: 1078174 bp
Completed: Nov 9, 1999.
Number of genes: 512

Saccharomyces cerevisiae chromosome XIII

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001145
Total Bases: 924429 bp
Completed: Nov 9, 1999.
Number of genes: 461

Saccharomyces cerevisiae chromosome XIV

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001146
Total Bases: 784331 bp
Completed: Nov 9, 1999.
Number of genes: 393

Saccharomyces cerevisiae chromosome XV

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001147
Total Bases: 1091287 bp
Completed: Nov 9, 1999.
Number of genes: 536

Saccharomyces cerevisiae chromosome XVI

Purine/Keto/Coding Asymmetry Plot
Accession: NC_001148
Total Bases: 948062 bp
Completed: Nov 9, 1999.
Number of genes: 460

Salmonella enterica subsp. enterica serovar Typhi str. CT18

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003198
Total Bases: 4809037 bp
Completed: Nov 7, 2001.
Last updated:
Number of genes: 4395
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003384
Total Bases: 218160 bp
Completed: Jul 15, 2003.
Last updated:
Number of genes: 235
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003385
Total Bases: 106516 bp
Completed: Oct 26, 2001.
Last updated:
Number of genes: 128
Primary publication: Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18

Salmonella enterica subsp. enterica serovar Typhi Ty2

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004631
Total Bases: 4791961 bp
Completed: Mar 21, 2003.
Last updated:
Number of genes: 4318
Primary publication: Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18.

Staphylococcus epidermidis ATCC 12228

Sequenced by: Chinese National HGC Shanghai
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004461
Total Bases: 2499279 bp
Completed: Jan 2, 2003.
Last updated:
Number of genes: 2419
Primary publication: Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228).

Shigella flexneri 2a str. 301

Sequenced by: Microbial Genome Center of ChMPH
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004337
Total Bases: 4607203 bp
Completed: Oct 16, 2002.
Last updated:
Number of genes: 4180
Primary publication: Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157.

Shigella flexneri 2a str. 2457T

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004741
Total Bases: 4599354 bp
Completed: Apr 23, 2003.
Last updated:
Number of genes: 4068
Primary publication: Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T.

Sinorhizobium meliloti 1021

Sequenced by: MELILO
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003047
Total Bases: 3654135 bp
Completed: Oct 5, 2001.
Last updated:
Number of genes: 3341
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003037
Total Bases: 1354226 bp
Completed: Mar 29, 2001.
Last updated:
Number of genes: 1294
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003078
Total Bases: 1683333 bp
Completed: Aug 16, 2001.
Last updated:
Number of genes: 1570
Primary publication: The composite genome of the legume symbiont Sinorhizobium meliloti.

Streptococcus mutans UA159

Sequenced by: Univ. Oklahoma
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004350
Total Bases: 2030921 bp
Completed: Oct 25, 2002.
Last updated:
Number of genes: 1960
Primary publication: Genome sequence of Streptococcus mutans UA159, a cariogenic dental pathogen.

Shewanella oneidensis MR-1

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004347
Total Bases: 4969803 bp
Completed: Sep 12, 2002.
Last updated:
Number of genes: 4323
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004349
Total Bases: 161613 bp
Completed: Sep 12, 2002.
Last updated:
Number of genes: 148
Primary publication: Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis.

Streptococcus pneumoniae TIGR4

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003028
Total Bases: 2160837 bp
Completed: Oct 3, 2001.
Last updated:
Number of genes: 2094
Primary publication: Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae

Streptococcus pyogenes M1 GAS

Sequenced by: Univ. Oklahoma
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002737
Total Bases: 1852441 bp
Completed: Sep 19, 2001.
Last updated:
Number of genes: 1697
Primary publication: Complete genome sequence of an M1 strain of Streptococcus pyogenes.

Streptococcus pyogenes MGAS315

Sequenced by: Lab of Human Bacterial Pathogenesis
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004070
Total Bases: 1900521 bp
Completed: Jul 18, 2002.
Last updated:
Number of genes: 1865
Primary publication: Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence.

Streptococcus pyogenes MGAS8232

Sequenced by: Lab of Human Bacterial Pathogenesis
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003485
Total Bases: 1895017 bp
Completed: Jan 31, 2002.
Last updated:
Number of genes: 1845
Primary publication: Genome sequence of a serotype M3 strain of group A Streptococcus: Phage-encoded toxins, the high-virulence phenotype, and clone emergence

Streptococcus pyogenes SSI-1

Sequenced by: Osaka Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004606
Total Bases: 1894275 bp
Completed: Mar 10, 2003.
Last updated:
Number of genes: 1861
Primary publication: Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence.

Sulfolobus solfataricus P2

Sequenced by: European-Canadian Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002754
Total Bases: 2992245 bp
Completed: Oct 3, 2001.
Last updated:
Number of genes: 2977
Primary publication: The complete genome of the crenarchaeon Sulfolobus solfataricus P2.

Sulfolobus tokodaii str. 7

Sequenced by: NITE
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003106
Total Bases: 2694756 bp
Completed: Oct 4, 2001.
Last updated:
Number of genes: 2826
Primary publication: Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7.

Salmonella typhimurium LT2

Sequenced by: Wash.U-GSC
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003197
Total Bases: 4857432 bp
Completed: Nov 7, 2001.
Last updated:
Number of genes: 4425
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003277
Total Bases: 93939 bp
Completed: Oct 26, 2001.
Last updated:
Number of genes: 102
Primary publication: Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.

Synechocystis sp. PCC 6803

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000911
Total Bases: 3573470 bp
Completed: Oct 23, 2001.
Last updated:
Number of genes: 3167
Primary publication: Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions.

Thermoplasma acidophilum

Sequenced by: Max-Planck-Institute for Biochemistry
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002578
Total Bases: 1564906 bp
Completed: Oct 12, 2001.
Last updated:
Number of genes: 1482
Primary publication: The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum

Thermosynechococcus elongatus BP-1

Sequenced by: Kazusa
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004113
Total Bases: 2593857 bp
Completed: Aug 19, 2002.
Last updated:
Number of genes: 2475
Primary publication: Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1.

Thermotoga maritima

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000853
Total Bases: 1860725 bp
Completed: Sep 10, 2001.
Last updated: .
Number of genes: 1858
Primary publication: Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima.

Treponema pallidum

Sequenced by: TIGR
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_000919
Total Bases: 1138011 bp
Completed: Sep 7, 2001.
Last updated: .
Number of genes: 1036
Primary publication: Complete genome sequence of Treponema pallidum, the syphilis spirochete

Thermoanaerobacter tengcongensis

Sequenced by: Beijing Center HGP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003869
Total Bases: 2689445 bp
Completed: Oct 7, 2001.
Last updated:
Number of genes: 2588
Primary publication: Thermoanaerobacter tengcongensis sp. nov., a novel anaerobic, saccharolytic, thermophilic...

Thermoplasma volcanium GSS1

Sequenced by: NIBHT-JP
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002689
Total Bases: 1584804 bp
Completed: Mar 22, 2001.
Last updated:
Number of genes: 1499
Primary publication: Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium.

Tropheryma whipplei TW08/27

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004551
Total Bases: 925938 bp
Completed: Feb 27, 2003.
Last updated:
Number of genes: 783
Primary publication: Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei.

Tropheryma whipplei str. Twist

Sequenced by: Genoscope
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004572
Total Bases: 927303 bp
Completed: Feb 24, 2003.
Last updated:
Number of genes: 808
Primary publication: Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a reduced genome.

Ureaplasma urealyticum

Sequenced by: University of Alabama
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002162
Total Bases: 751719 bp
Completed: Jan 10, 2000
Last updated: .
Number of genes: 614
Primary publication: The complete sequence of the mucosal pathogen Ureaplasma urealyticum

Vibrio cholerae

Sequenced by: TIGR
Local FTP
Last updated:
Primary publication: DNA Sequence of both chromosomes of the cholera pathogen Vibrio cholerae

Vibrio cholerae chromosome I

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002505
Total Bases: 2961149 bp
Completed: Sep 10, 2001.
Last updated:
Number of genes: 2742

Vibrio cholerae chromosome II

Purine/Keto/Coding Asymmetry Plot
Accession: NC_002506
Total Bases: 1072315 bp
Completed: Sep 10, 2001.
Last updated:
Number of genes: 1093

Vibrio parahaemolyticus RIMD 2210633

Sequenced by: Osaka Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004603
Total Bases: 3288558 bp
Completed: Mar 10, 2003.
Last updated:
Number of genes: 3080
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004605
Total Bases: 1877212 bp
Completed: Mar 10, 2003.
Last updated:
Number of genes: 1752
Primary publication: Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae.

Vibrio vulnificus CMCP6

Sequenced by: Chonnam Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004459
Total Bases: 3281945 bp
Completed: Dec 23, 2002.
Last updated:
Number of genes: 2952
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004460
Total Bases: 1844853 bp
Completed: Dec 23, 2002.
Last updated:
Number of genes: 1562

Vibrio vulnificus YJ016

Sequenced by: NHRI, Taiwan
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005128
Total Bases: 48508 bp
Completed: Oct 9, 2003.
Last updated:
Number of genes: 69
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005139
Total Bases: 3354505 bp
Completed: Oct 15, 2003.
Last updated:
Number of genes: 3259
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005140
Total Bases: 1857073 bp
Completed: Oct 15, 2003.
Last updated:
Number of genes: 1696
Primary publication: Comparative Genome Analysis of Vibrio vulnificus, a Marine Pathogen

Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

Sequenced by: Yale Univ.
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004344
Total Bases: 697724 bp
Completed: Oct 24, 2002.
Last updated:
Number of genes: 611
Primary publication: Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia.

Wolinella succinogenes DSM 1740

Sequenced by: Max-Plank-Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_005090
Total Bases: 2110355 bp
Completed: Sep 10, 2003.
Last updated:
Number of genes: 2044
Primary publication: Complete genome sequence and analysis of Wolinella succinogenes

Xanthomonas campestris pv. campestris str. ATCC 33913

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003902
Total Bases: 5076188 bp
Completed: Nov 28, 2001.
Last updated:
Number of genes: 4181
Primary publication: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

Xanthomonas axonopodis pv. citri str. 306

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003919
Total Bases: 5175554 bp
Completed: Nov 28, 2001.
Last updated:
Number of genes: 4312
Primary publication: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.

Xylella fastidiosa

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002488
Total Bases: 2679306 bp
Completed: Oct 2, 2001
Last updated: .
Number of genes: 2766
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002489
Total Bases: 1286 bp
Completed: Jun 2, 2000
Last updated: .
Number of genes: 2
Purine/Keto/Coding Asymmetry Plot
Accession: NC_002490
Total Bases: 51158 bp
Completed: Jun 2, 2000
Last updated: .
Number of genes: 64
Primary publication: The genome sequence of the plant pathogen Xylella fastidiosa

Xylella fastidiosa Temecula1

Sequenced by: Sao Paulo state (Brazil) Consortium
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004554
Total Bases: 1346 bp
Completed: Feb 1, 2003.
Last updated:
Number of genes: 2
Accession: NC_004556
Total Bases: 2519802 bp
Completed: Feb 3, 2003.
Last updated:
Number of genes: 2034
Primary publication:

Yersinia pestis CO92

Sequenced by: Sanger Institute
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003131
Total Bases: 70305 bp
Completed: Sep 3, 1999.
Last updated:
Number of genes: 72
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003132
Total Bases: 9612 bp
Completed: Aug 19, 1999.
Last updated:
Number of genes: 9
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003134
Total Bases: 96210 bp
Completed: Sep 6, 1999.
Last updated:
Number of genes: 101
Purine/Keto/Coding Asymmetry Plot
Accession: NC_003143
Total Bases: 4653728 bp
Completed: Oct 15, 2001.
Last updated:
Number of genes: 3885
Primary publication: Genome sequence of Yersinia pestis, the causative agent of plague.

Yersinia pestis KIM

Sequenced by: Univ. Wisconsin
Local FTP
Purine/Keto/Coding Asymmetry Plot
Accession: NC_004088
Total Bases: 4600755 bp
Completed: Jul 29, 2002.
Last updated:
Number of genes: 4086
Primary publication: Genome Sequence of Yersinia pestis KIM